| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_9208 |
|---|
| Symbol | |
|---|
| ID | 8672554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 10155119 |
|---|
| End bp | 10155937 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | dTDP-4-dehydrorhamnose reductase-like protein |
|---|
| Protein accession | YP_003344570 |
|---|
| Protein GI | 271970374 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.99398 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTCC TCATCGTCGG TGGCAGTGGT TTTCTCGGCG GCGAACTCGC TCGGCAGTGT
CTGGTGGCCC GGCATGAGGT GGCTGCGACC TACCTGACCC GATCAGGCAA GACCGCAAGT
GTTGAATGGT TGCCGCTCGA TGTGCGCCGA CGAGAGGACG TCGACGCGCT GATCAGCACA
TTTCGGCCAG AGGTGGTCAT TAACGCTGCG TTCCGGCAGA CAGATTGGGC GACCACGGCG
ATTGGAGCCG CGAACGTGGC GCTCGCCGCC TCTGCGGCAG GCGGGCGCCT GGTCCATGTG
TCCAGCGACG CGGTCTTCTC CGGTGCCGCG ATCCGCTATG ACGAGACATG CGTCCCTGAC
CCGATCAGCC CGTACGGTGC GGCTAAAGCC GCTGCCGAGA CAGCAGTGAA CGCGATCGCA
CCAACCGCGG TGACAGCCCG GACATCTCTG ATCATTGGTG ACGGTGATTC TCCGCACGAG
GCGCTGGTGC ATTCACTGGC CACCGGCAGG GCGAGAGGAA TGCTGTTCAC CGACGACGTG
CGATGTCCCG TGCATGTCGC CGATCTCGCT GCGGCGCTCC TCGAACTTGC CGTATCCGAG
TATCACGGCA TCCACCATGT CGCTGGGACC GACGCGGTAA GCCGATACGA GCTGGGGCTG
CTCATCGCCC GACGTGATGG ACTCGACGCG GACCGATTGC CCTCAGGCCG GCGAGCAGAC
ACCAACATGC CCGGCCCGAT AGATGTGCGC TTGGAGTGCG GCATGACTCA GCGGCGGCTC
CGGACCAGGC TGCGTGGCGC GCGGCAGTTT CTGGGGTGA
|
|---|
| Protein sequence | MRFLIVGGSG FLGGELARQC LVARHEVAAT YLTRSGKTAS VEWLPLDVRR REDVDALIST
FRPEVVINAA FRQTDWATTA IGAANVALAA SAAGGRLVHV SSDAVFSGAA IRYDETCVPD
PISPYGAAKA AAETAVNAIA PTAVTARTSL IIGDGDSPHE ALVHSLATGR ARGMLFTDDV
RCPVHVADLA AALLELAVSE YHGIHHVAGT DAVSRYELGL LIARRDGLDA DRLPSGRRAD
TNMPGPIDVR LECGMTQRRL RTRLRGARQF LG
|
|---|
| |