Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_9207 |
Symbol | |
ID | 8672553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 10153089 |
End bp | 10154846 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | transposase IS4 family protein |
Protein accession | YP_003344569 |
Protein GI | 271970373 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.63924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGGGG ATACCGGCCG GGTGATCCCG GCGGAGACGG TCCGTGCGGC CTGGGCGGCC AATCCTTCTG GAACTCCGGC GATGTGGATC CGGGACCGGC TCGCGGGAGT GTTCGGCGAG AAGGACTTCG TCGGCTGGTT TCCCGCTGAT GGGCGGCGTG GATTGTCGCC GGTGGTGTTG GCGCTGGTCA GCGTGTTGCA GTTCGCGGAG AACCTGACCG ATCGGCAGGC GGCGCTGGCG GTGCGATGCC GGATCGACTG GAAGTACTGC CTCGGGCTGG AGCTGACGGA TCCGGGGTTC GACCACTCTG TGCTCTCGGA GTTCCGAGAT CGGATGGCCC AAGACGATCG GGCGGACCGA CTGCTGGCGG TGATGGTGCA ACGGCTGGTC GAGGCGGGGC TGGTCAAGCA GCGGGGCCGG GTCCGGACCG ATTCCACGCA TGTGCTGGCC GCGGTCCGCA AGCTCAACCG CGTCGAGTTG GTCGGGGAGA CGCTGCGGGT CGCGCTGGAG GAACTCGCCG CCGCCGATGA ACCCTGGCTG GCCGCCCTGA TCACCCCGGA GTGGGCCAGC CGCTATGGCC GGCCGGTCCG CTATGACCGG CTGCCGCGCG GCAAGGATGA TCTGGCCGCG CACGTGCTGC AGATCGGCCA GGACGGGATG ACGGTCCTGG AGGCGGTGCA TGCGGCCGGG GCGTCGCGTC GGCTGCGGGA TCTGCCGGGG GTGCAGGTAC TGCGTCAGGT ATGGGTGCAG CAGTACTGGA CAGACTCCTA CGGTGATCTG GCCTGGCGAG CCGCCAAGTC CAGCCGGGAC CGGCAGAGCC GCCACGGCCG GCCGCGTCGG TCATCCGGCG AGGAAAGCGG CCAACAGCCG GACCCGGCAC GGGTGCCATG GTCCGGGATC GAGATCGTCA GTCCGCACGA TCCCGAAGCC CGGTACTGCC GCAAGGAAGG AAAAACGACC ACGAAAGCTG AGTGGGTCGG CTACCGGGAT CATCAGAGCG AGACCTGCGA CGACAATGTT CCCAACGTGA TCGTTCACGT CCTCACCCGC CCGGCGCCGG TCCAGGACAT CGATGCCGTG GACGACATCC ACGCGGGCCT GGCCGCCAGC GGCTTGACCC CGGCCGAGCA TCTCCTCGAC AGCGGATACG TCACCCCGGA CGTCATCCAC CACACCGCCC AGCAGTGGGG CGTCGCTCTG ATCGGGCCAG TTCGAGCCGA CCCGCGAGGC CGCCACGGGT TCACCAAGGA AGACTTCCAC GTCAACTGGG ACGATCACAC CGTCACCTGC CCGCGCGGGG TGACCAGCCC GCCCTTCAAA CCCACCCTCG GCGATGGCAA GCCTCGCCTG TCGGTGCTGT TCCCCCGCGC GGCCTGCCGG GCCTGCCCAG ACCGCCAGGC CTGCACCGGT GACGCCAACG GCAAGGGTCG CCACCTCACC CTGCTGCCCG AGCCGCTGCA GCAGATCCAG ACCCGCAATC GCGCCGACCA GCACACCGAA CCTTGGAAGG CCCGCTACGC CCTGCGCGCC GGCTGCGAGG CCACCGTCTC CGAAACCACC CGCGCCCACG GCCTACGCAA TTGCCGCTAC AAAGGCCTCG CCAAAACCCA CGTCCAGCAC GTCCTGACCG CGGCCGGCAC CAACGTCATC CGCCTCGCCG ACTGCTACAC CCCCGGCATC ATCCCCGACC GACCGCCACG TCCGATCAGC CCGTTCCAAC AACTCTGCCG ACGGCTGGCC GCCCAGACCC CAGAATGA
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Protein sequence | MGGDTGRVIP AETVRAAWAA NPSGTPAMWI RDRLAGVFGE KDFVGWFPAD GRRGLSPVVL ALVSVLQFAE NLTDRQAALA VRCRIDWKYC LGLELTDPGF DHSVLSEFRD RMAQDDRADR LLAVMVQRLV EAGLVKQRGR VRTDSTHVLA AVRKLNRVEL VGETLRVALE ELAAADEPWL AALITPEWAS RYGRPVRYDR LPRGKDDLAA HVLQIGQDGM TVLEAVHAAG ASRRLRDLPG VQVLRQVWVQ QYWTDSYGDL AWRAAKSSRD RQSRHGRPRR SSGEESGQQP DPARVPWSGI EIVSPHDPEA RYCRKEGKTT TKAEWVGYRD HQSETCDDNV PNVIVHVLTR PAPVQDIDAV DDIHAGLAAS GLTPAEHLLD SGYVTPDVIH HTAQQWGVAL IGPVRADPRG RHGFTKEDFH VNWDDHTVTC PRGVTSPPFK PTLGDGKPRL SVLFPRAACR ACPDRQACTG DANGKGRHLT LLPEPLQQIQ TRNRADQHTE PWKARYALRA GCEATVSETT RAHGLRNCRY KGLAKTHVQH VLTAAGTNVI RLADCYTPGI IPDRPPRPIS PFQQLCRRLA AQTPE
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