Gene Sros_9175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_9175 
Symbol 
ID8672521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp10119888 
End bp10121858 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content66% 
IMG OID 
ProductMicrotubule-severing ATPase 
Protein accessionYP_003344537 
Protein GI271970341 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.785348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCA AGCGATTTAC ACGTGGGCCA CTGCTGTGGA TCCTGGGCAT CGTCGTGCTG 
CTCCTGCTCG TCACCACGAT GTGGAGCGGC GACGGCAACT ACGAGAAGGC CGACACTTCG
AAGATCATTA GTTGGATCGA CGAAGGCAAG GTCTCCAACG CGAAGATCAT CGACAAGGAC
CAGCGCATCG AGGTCACTCT GACCGACAAG AAGCGCTACT ACTCCTCGTG GGTGACCGGG
CAGGGTGTCC AGCTCGCAGA CAAGCTCGAA GCCGCCGAGA ACAGCGGCAA GCTCACCGGC
GGCTACACCG TCGACGTGCC GAAGGAGAAC TTCCTCCTCG GCCTCCTGGT GAGCTTCCTG
CCGATCGTCA TCATCGTGCT GATCTTCCTG TTCATCATGA ACCAGATGCA GGGCGGCGGC
TCCCGGGTGA TGAACTTCGG CAAGTCGAAG GCCAAACTCA TCACCAAGGA CACCCCGAAG
ACCACCTTCG CCGACGTCGC GGGCGCGGAC GAGGCCATCG AGGAGCTCCA GGAGATCAAG
GAGTTCCTGC AGGCCCCGGC CAAGTTCCAG GCGATCGGCG CGAAGATCCC CAAGGGCGTC
CTGCTCTACG GCCCGCCCGG AACCGGCAAG ACCCTGCTCG CCAGGGCCGT CGCCGGCGAG
GCCGGGGTGC CGTTCTACTC GATCTCCGGT TCCGACTTCG TCGAGATGTT CGTCGGTGTC
GGCGCCTCGC GAGTCCGCGA CCTGTTCGAG CAGGCCAAGG CGAACGCGCC GGCGATCATC
TTCATCGACG AGATCGACGC GGTGGGCCGT CACCGCGGCG CCGGTCTCGG CGGTGGTCAC
GACGAGCGCG AGCAGACGCT GAACCAGCTC CTCGTCGAGA TGGACGGCTT CGACGTCAAG
GGCGGCGTGA TCCTGATCGC CGCGACCAAC CGGCCCGACA TCCTGGACCC GGCACTGCTG
CGTCCGGGAC GTTTCGACCG CCAGGTCACC GTCGACCGTC CCGACCTGGA GGGCCGTAAG
GGCATCCTCA AGGTGCACGG CCGCGGCAAG CCGTTCGCCG AGGGCGTCGA GCTCGACATC
ATCGCCCGCC GGACGCCCGG TTTCACCGGT GCCGACCTGG CGAACGTGAT CAACGAGGCC
GCGCTGCTCA CCGCCCGCGC GGACCAGAAG CTGATCACGA TGGAGATGCT CGAGGAGTCC
ATCGACCGCG TGATGGCCGG TCCGGAGCGC AAGACCCGCG TCATGTCGGA CCAGGAGAAG
AAGATCATCG CGTACCACGA GGGTGGTCAC GCCCTGGTCG CGCACGCGCT GCCCAACTCC
GACCCGGTCC ACAAGATCAC GATCCTGTCC CGCGGCCGCG CCCTCGGTTA CACGATGACG
CTGCCGATGG AGGACAAGTT CCTGGCGACC CGCTCGGAGA TGCTGGACCA GCTCGCGATG
CTGCTGGGCG GGCGCACGGC GGAGGAGCTC GTCTTCCACG AGCCCACCAC CGGTGCCTCC
AACGACATCG AGAAGGCCAC CTCCATCGCC CGCCGCATGG TCACCGAGTA CGGCATGAGC
GAGCAGCTCG GCGCGCGGAA GTTCGGCAGC GGCAACGCCG AGGTCTTCCT CGGCCGTGAG
ATGGGTCACG AGCGCGACTA CTCCGAGAAG ATCGCCTCCA CGATCGACGA GGAGGTGCGC
CGCCTGATCG AGGCCGGCCA CGACCAGGCC TGGGAGATCC TCGTCGAATA CCGCGACGTG
CTCGACAACC TGGTGCTCGA ACTCATGGAG AAGGAGACGC TCTCCCGCGA CATGGTGCTG
CAGATCTTCG CGCCGGTGGT CGTCAAGGAG AAGCGCCCCT CCTACTCCGG CTACGGCAAG
CGGCTCCCCT CGGACCGCCC GCCGATCCTG ACCCCGAAGG AGCAGTCCGG CAACGGCGCG
CTCCCCGCGG GCGCGGGTCA CGTCGACTCC GTGCCCAGGG ACGGGAACTG A
 
Protein sequence
MDLKRFTRGP LLWILGIVVL LLLVTTMWSG DGNYEKADTS KIISWIDEGK VSNAKIIDKD 
QRIEVTLTDK KRYYSSWVTG QGVQLADKLE AAENSGKLTG GYTVDVPKEN FLLGLLVSFL
PIVIIVLIFL FIMNQMQGGG SRVMNFGKSK AKLITKDTPK TTFADVAGAD EAIEELQEIK
EFLQAPAKFQ AIGAKIPKGV LLYGPPGTGK TLLARAVAGE AGVPFYSISG SDFVEMFVGV
GASRVRDLFE QAKANAPAII FIDEIDAVGR HRGAGLGGGH DEREQTLNQL LVEMDGFDVK
GGVILIAATN RPDILDPALL RPGRFDRQVT VDRPDLEGRK GILKVHGRGK PFAEGVELDI
IARRTPGFTG ADLANVINEA ALLTARADQK LITMEMLEES IDRVMAGPER KTRVMSDQEK
KIIAYHEGGH ALVAHALPNS DPVHKITILS RGRALGYTMT LPMEDKFLAT RSEMLDQLAM
LLGGRTAEEL VFHEPTTGAS NDIEKATSIA RRMVTEYGMS EQLGARKFGS GNAEVFLGRE
MGHERDYSEK IASTIDEEVR RLIEAGHDQA WEILVEYRDV LDNLVLELME KETLSRDMVL
QIFAPVVVKE KRPSYSGYGK RLPSDRPPIL TPKEQSGNGA LPAGAGHVDS VPRDGN