| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_9074 |
|---|
| Symbol | |
|---|
| ID | 8672420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 10012076 |
|---|
| End bp | 10013989 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway)-like protein |
|---|
| Protein accession | YP_003344440 |
|---|
| Protein GI | 271970244 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCTTCG TGACCTATGC CGCCGAGGAC GGTGACCGTG CCGGCGTCCT CGACGGCGAC
CTGATCCACG CCTTTCCCCC GGGGACGACC CTGCTCGGAC TGCTCGGCTC CGGGCTGCGG
CAGGCGGGCG AGCAGGCGCT CGCCGAACCG GACGAGGTCG TGCCGCTGTC CGACGTCATG
GTGCGGGCCC CCATCCCCAG GCCCCCGTCC ATCCGGGACT GCCTGTGCTT CCTCGACCAC
ATGCGCGGCT GCCTGAAAGC CACCGGTGGC ACGGGGGACC TGGAGCCCAC CTGGTACCAG
ATCCCGGCTT TCTACTTCGC CAACCCCGCC ACCGTCATCG GACCCCACGA CGACGTACCC
ATCTCGCCGG GCAGCGCATG GTTCGACTTC GAGCTGGAGA TCGGCGCGGT GATCGGCACC
GCGGGCCGCG ACCTGACCCC CGAGCAGGCC GAGGAGCACA TCGCCGGCTA CACCCTGATG
TGCGACTGGA GCGCCCGCGA CCTGCAGGGC CTGGAGAGCC AGCTCAAGAT CGGCCAGGCG
AAGGGCAAGG ACGGGGCGAC CACGCTCGGC CCCTGGCTCG TCACCCCCGA CGAGCTGCCC
GCCGGCCTCG CCGTCGCGGT GCGCGCCGAG GTCAACGGCG TCACCGTCGG CGAAGGCCGC
GCCGACGCGA TGGACTGGTC CTTCGGCGAG GTGATCTCCT ACGCCTCCCG CGGCGCCGAG
CTCCAGCCGG GCGACGTCTT CGGCTCCGGC ACCGTGCCCG GCTGCTGCCT CATCGAGCAC
CTCAGCTTCG CCGACCTGGC CGCCTTCCCC GGCTGGCTCA AGGACGGCGA CGTGGTACGG
CTGAGCGCCG AGGGACTGGG CGAGATCCGG CAGACCGCGC GGGCTTCGGC CGCACCGTAC
CCGCTGGCCG CCCGGCCCGA TCCCGCCGCC GGACCACGAC GACCGCGCCG CAACCCGGCC
CCCTCCGCCC TGCCGTACAC GGCGGGGCTC CACCAGGTCG GCGAGGGCGT CTGGGCGTGG
CTGCTACCCG ACGGCGGCTA CGGCAGGAGC AACGCGGGCC TGGTCACGGG CGAGGGTGCG
TCCCTGCTGG TCGACACCCT CTACGACCTG TCACTGACCG GGGAGATGCT GGACGGCATG
CGGGTCGTCA CCGATCGGCA CCCGCTGACC CACGCCGTGC TCACCCACGC CGACGGCGAC
CACACCCACG GCGGCGGGCT CCTGCCCGCC CAGGTGCGCG TGATCACCGC CGAGGGGACC
GCGCATGGGA TGCGCACCGA GATGCCGCCG GAGCTGACGG CGGCGCTGCA GGTGATGGAC
CTCGGGCCGG TGCTCACGCC GTACATGCGC GAGCGCTTCG GCGGCTTCGA CTTCGGGGGC
ATCCGCCTGC GCGAGCCTGA CCAGACCTTC CAGCGGCGGC TCACCCTCGA CGTGGGCGGC
CGCGAGGTGC GCCTGCTCGA CCTCGGGCCG GCCCACACCG AGGCCGACAC GGTGGTCCAC
GTACCGGACG CGGGCGTGCT GTTCGCCGGC GACCTGCTGT TCATCGGATG CACGCCGATC
GTGTGGAGCG GCCCCATCGC CAACTGGATC TCCGCCTGCG ACACGATGCT CGCCCTGGAC
GCGCCGACCG TCGTCCCCGG CCACGGCCCG GTGACGGACC CGGACGGGAT CCGCGCCGTG
CGCGCCTACC TCGCCCACGT CGTCGAGCAG GCCGACCTCG CCCACGCCAA GGGCCTGAAC
CTGCGAGAGG CGGCGTTCGC CGCCGACCTG GCCGACTACG CCTCCTGGCT GGACGCCGAG
CGGATCGTGG TCAACATCTA CCGGCGCTAC CGGGAGATCG ATCCCGAGCA GCCCGTGCTC
GACAGGTTCG CGCTGTTCGC CCTGATGGCC GAATGGGAGG CCGCCCGCTC ATGA
|
|---|
| Protein sequence | MRFVTYAAED GDRAGVLDGD LIHAFPPGTT LLGLLGSGLR QAGEQALAEP DEVVPLSDVM
VRAPIPRPPS IRDCLCFLDH MRGCLKATGG TGDLEPTWYQ IPAFYFANPA TVIGPHDDVP
ISPGSAWFDF ELEIGAVIGT AGRDLTPEQA EEHIAGYTLM CDWSARDLQG LESQLKIGQA
KGKDGATTLG PWLVTPDELP AGLAVAVRAE VNGVTVGEGR ADAMDWSFGE VISYASRGAE
LQPGDVFGSG TVPGCCLIEH LSFADLAAFP GWLKDGDVVR LSAEGLGEIR QTARASAAPY
PLAARPDPAA GPRRPRRNPA PSALPYTAGL HQVGEGVWAW LLPDGGYGRS NAGLVTGEGA
SLLVDTLYDL SLTGEMLDGM RVVTDRHPLT HAVLTHADGD HTHGGGLLPA QVRVITAEGT
AHGMRTEMPP ELTAALQVMD LGPVLTPYMR ERFGGFDFGG IRLREPDQTF QRRLTLDVGG
REVRLLDLGP AHTEADTVVH VPDAGVLFAG DLLFIGCTPI VWSGPIANWI SACDTMLALD
APTVVPGHGP VTDPDGIRAV RAYLAHVVEQ ADLAHAKGLN LREAAFAADL ADYASWLDAE
RIVVNIYRRY REIDPEQPVL DRFALFALMA EWEAARS
|
|---|
| |