Gene Sros_9006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_9006 
Symbol 
ID8672348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9954035 
End bp9954742 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003344380 
Protein GI271970184 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.782569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACA TTGACCCGGA AGCCCTGGTC GCCAGTCTGA GACGGCTTCA GACGACCTCG 
CCCACGACAG GCATAGTCCA TCAGCTTGAG CGGGCTGTGG ATGTCGTGGA CACGCTTTTC
GGCTATTCGG GTGCGGGCCT GATGTTTGCG GAGGAGGGCA AGGATCTGCG CTACTTGGTC
GCCACCGACG ACCGGGGCCG CAGCCTTGAG GGAGCCCAGC TCCACCTCGG CCAGGGTCCG
TGTGTGTCCG CCTACGAAGA GAACACCGCG GTGACCTCGT TCGACGTGCA TGTGGATCCG
CGCTGGCCGA AGCTCGCCGA CCGGCTCCAC CCCGAGGTGC GGGCGGTCGC CGGAGTGCCG
GTGCGGCTTG GCGGAGACCC TGTGGGCACC TTGAACGTCT ACCAGTCCGA GCCCTACAAC
TGGGATGAGT CGGATATCCA GGCTCTTTAC GCCTATGCCG ACGTGATCGA GCAACTGCTC
ACCGCGGCGA TGGCGGCCGA GGAGAAGAGC GCCCTGGCCG ATCAGCTCCA GTACGCCCTC
GACTACCGGG TGATCATCGA GCGGGCCGTC GGCTACCTGA TGGGCAAACA CGATCTCACC
GCCGCCCAGG CCTTCACCGG CCTGCGCAAG CAGGCCCGGG ACAGCCGCCG CCGGGTCGCC
GACCTCGCGG CTGAGGTGCT CGGTGAGGGG GCCGGCGAAT TACGGTGA
 
Protein sequence
MTHIDPEALV ASLRRLQTTS PTTGIVHQLE RAVDVVDTLF GYSGAGLMFA EEGKDLRYLV 
ATDDRGRSLE GAQLHLGQGP CVSAYEENTA VTSFDVHVDP RWPKLADRLH PEVRAVAGVP
VRLGGDPVGT LNVYQSEPYN WDESDIQALY AYADVIEQLL TAAMAAEEKS ALADQLQYAL
DYRVIIERAV GYLMGKHDLT AAQAFTGLRK QARDSRRRVA DLAAEVLGEG AGELR