Gene Sros_8987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8987 
Symbol 
ID8672329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9935172 
End bp9936608 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content72% 
IMG OID 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_003344361 
Protein GI271970165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCTA CCCGCAAGTG GTGGGCGCTG GGAGCGATCT CGCTGGCCAC TTTCATGACG 
TACCTGGACA ACAACGTGGT CAACGTCGCG TTGCCGACGA TCCAGCGGGA CCTCGGGGTA
AGCATCTCGG GGCTGGAGTG GATCGTGAGC GGCTACATCC TGGTCTTCGC CGGGCTGATG
CTGGTCGGCG GGCGCCTGGC GGACGTCTTC GGCCGGCGGC GGATCTTCAT GATCGGTCTC
GGCGTGTTCA CCGTGGCGTC GTTGGCCGCC GGTCTGGCCA CGGACGGCAC GGGTCTGATC
GCCGCCCGGG CGCTGCAGGG CGTCGGCGCC GCGTTCCTCA CGCCCACCGC GCTCGCGCTG
CTCACCTCGA TCTTCCCCGA CCCCCGGGAA CGCGCCACGG CGGTCGGCAT GTGGAGCGCG
GTCGGCGCGC TGGCCCTGGC CCTCGGCCCG CTGACCGGCG GGTTCATCAG CGAGCGGTGG
GACTGGGGGT GGATCTACCT GATCAACGTA CCGATCGGGA TCGCGACCTT CGGACTCGGC
CTGTGGGCGA TCAGAGTGGC CCCGCAGGAT CGGGTACGGC ACAGCCTGGA CGTCCCCGGA
CTGGTGACGT CCGGCCTGGC GCTGTCCGCG CTGACGTACG GGCTGATCGA GGGCGACGGG
GCCGGCTGGA CCTCGCCGGA GATCCTGGGC GCCTTCGGGC TCGCGGTGGC GGCGGCGGTG
ACGTTCGTGG TGATCGAGAC CAGGAGCCGG GAGCCGATGA TCGACCTGTC GCTGTTCCGG
TCGCGGGTCT TCAGCGGGGG CGTGCTCTCG ATGGGGCTGT GGTCGTTCGG GGTGTTCGGG
ATCTACTTCT TCACGGCGCT CTACCTGCAG AACGCGCTGG GCTTCTCACC GATGGAGGCC
GGGGTCTCGT TCGTGCCCAT GGCCCTGGTG ATGGCGGTGA CCGCGGCCGT CGCCTCGCGG
ATCAGCGGCG CGCTCGGGAC CGCGCGGACC GTGGCCGCCG GGCTCCTGCT GATGGCCGCG
GCGGTGTTCG GGCTCTCCTT CATCGGCGAG GGCGCCTCGT TCGGGGAACT GCTGCCGTGG
TTCCTGGTCT ACGGGCTGGG CGGCGGGCTG CTGGTACCGC TCACCACGGC CATCCTGGGC
ACGCTCCCCG CCGGCCGCGC CGGGGTGGCC TCGGGCGTGC TGAACGTCTC CCGGGAGATC
TTCGGCCTGC TCGGGATCAC CGTCCTCGGC GCGATCCTCA CCGGCCGGCA GACCTCGATC
CTCCGGGACG GCGCCACGCC GCTGACGGCC TTCCTGGAGG CCTACCAGTC CACGCTGGTC
ATCGCGGCGG CCATCGTGCT GGTGGGCGTG CCGGTCAGCC TGTTCGCCCT GCGGATCCCC
CGGACCCCGG AGCACGTGGA GGCCCCCGCC GAGCGCCCCG CCGTACCGGT GGCGTGA
 
Protein sequence
MTATRKWWAL GAISLATFMT YLDNNVVNVA LPTIQRDLGV SISGLEWIVS GYILVFAGLM 
LVGGRLADVF GRRRIFMIGL GVFTVASLAA GLATDGTGLI AARALQGVGA AFLTPTALAL
LTSIFPDPRE RATAVGMWSA VGALALALGP LTGGFISERW DWGWIYLINV PIGIATFGLG
LWAIRVAPQD RVRHSLDVPG LVTSGLALSA LTYGLIEGDG AGWTSPEILG AFGLAVAAAV
TFVVIETRSR EPMIDLSLFR SRVFSGGVLS MGLWSFGVFG IYFFTALYLQ NALGFSPMEA
GVSFVPMALV MAVTAAVASR ISGALGTART VAAGLLLMAA AVFGLSFIGE GASFGELLPW
FLVYGLGGGL LVPLTTAILG TLPAGRAGVA SGVLNVSREI FGLLGITVLG AILTGRQTSI
LRDGATPLTA FLEAYQSTLV IAAAIVLVGV PVSLFALRIP RTPEHVEAPA ERPAVPVA