Gene Sros_8980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8980 
Symbol 
ID8672322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9927875 
End bp9929929 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content72% 
IMG OID 
ProductAdenylate cyclase family 3 (some protein contain HAMP domain)-like protein 
Protein accessionYP_003344354 
Protein GI271970158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGACGA ACGACCTCAC GAGCACGTCA GCCGAGGGAC GCGTCAGGTC AGAGCCGTAT 
CTCCCGCCGG CGACCCAGCC GGTCCGCGCG GTGGTCTGGG TGATCCACCT GGCCCTGCCG
ATGCTGGGAC TCTGGCTGCT GCTGGCCAAC CACGACCACC TGAACATCGA GTGGCACGAC
AACCCCAGCC ATTTCTGGCT GATCATCGCC GTGGCGGGGA TCAACCTGGT CCTGGGCGCC
ATGATCGGCC AGGCGTCGGC CCGGCGGGCG GACGCCCGGC TGCTGCTGGT CTCGCTGGTC
TTCCTGAGCA GCGCGGGCTT CTTCCTGATG CACGGCCTGG CGACCCCCCG GATCATCCTC
GCGAAGGGAA CCTACGGGTT CGACCTCTCC CAGCCGATCG GTCTCCTCAT CGCCTCGGTC
TTCGCGGCCG TCTCGGCGCT GCCGCTGAAC GAGCGGACGG CCCAGGCCGT GCTCAGGTCG
CAGATCTGGC TGCGCGGCGG ACTCGTCGCG CTGCTCGTCG TGTGGGGAGT CGCCTCGCTG
GTGCCCGGCC TCACCGCGCT GAGCGACCCG GCTCCCCCGC GGGGCGCCGG TCTCGGCGGG
TTCGAGCTGG TCGGGGTCGC CCTGTACGCG GCGGCGACCG CGATGATGTT CCAGCTCCAC
CGCAGGCGCC CCGCCGCCAT GCTGGTCAGC CTGGTCACCG CCTACGCCCT GCTCGCCGAG
GCGATGATCG CCGGGATGTC GCGCCACAAC TGGCACCTGT CGTGGTGGCT GTGGCACGTG
CTGCTGACCG TGGCCTTCGT GTTCGTCGCC TACAGTGCCC ACCTGCAGTT CCGGCGGGAG
GGCTCCAGCG CGGGGCTGTT CGACTCGGTG GCGCTGTCGG CGACCGTACG GAAGATCAGG
GCCGAGTACG AGGACGCCCT GGAGGAGCTC GTCGGCCACA TCCGGCGGAG GGCCGAGAGC
AGGGTCCCGG TCGCGACCCG GCTGGCGGGC AAGTTCGGGC TCACCGAGGG CCAGGCGGCG
GTGCTCGACC GGGCCGGCGA GGCGCTGGCC AACGAGCGGG AGCTGTCCGA ACGGCTCGCC
GCGCTGGTGG ACACCGGCAA CCAGGCCCGC GTGGGACTGC CCGAGCGCGA GCTGCTGACC
CGGGCCCTGG ACCGCGTGCG GCAGGCGTAC GGCGACGTGC GCATCACGCT GGTGTCGGAG
GGGCGGGTCG CCATGGGCTC CGGGGAGTAC GGCCCCGGCG ACTTCCCGGG GAACCGGCCC
GTCCTGCTGG ACAGGACGGC CGTCCACCCG CTGACCGTGA AGGGACAGCT CGCCGGGGCG
CTGGAGGTGC CGGTGGGCAG GACCCCGCAG GACGAGGCGC TCGCCGCCAC GCTGGCGAGC
CAGCTGTCCC TCTCCCTGGA GAACGCCCGG CTCTACCGGG AGCTGTCCAC CCTGTTCCGG
CAGTACATGT CCCCGGACGT GGCGAACTCC CTGCTGGCCG ACCCGCGGAC GGCGGCGCTC
GGCGGCGAGC TGGTCGAGCT GACGGCCCTC TTCGCCGACC TGAAGGGCTT CACCAGCTTC
TCCGAGCGGG CCACGCCTGG AGAGATCGTC GAGATGCTGA ACCGCTATCA CACGGCGGCC
GTGCCCATCA TCCTCGGCAA CGGGGGCACG ATCGTGCAGT TCGTGGGGGA CGCGCTGCTG
GCGCTGTTCA ACGCGCCCGC CCCGCAGCCG GGACACGCCG CCGCCGCGGC GAGGGCGGCG
CTGGCCATGC AGGAGGCGGC CGAGGAGATC TGCGCCGGAA CCCCGGGCTA CCCCCGGTTC
AGGATCGGGA TCAACACCGG GCTCGCGCTG GTCGGCAACA TCGGCAGCCC CGAACTGCGC
GGGTTCAACG CGATGGGCGA CTGCGTGAAC GTGGCCGCCC GGCTGGAAGG CGTCGCCGAA
CCCGGTACCG TCGTGATCGG CCAGAGCACC CTCGACCTGA TAACCCCCCG CCCCAGGGTC
CGCTCCCTGG GCGAGCTCGC GCTCAAGGGC AAGGAGAAGC CCGTCCACGC ATACGTGCTG
TCCGGTCTGT CGTAG
 
Protein sequence
MSTNDLTSTS AEGRVRSEPY LPPATQPVRA VVWVIHLALP MLGLWLLLAN HDHLNIEWHD 
NPSHFWLIIA VAGINLVLGA MIGQASARRA DARLLLVSLV FLSSAGFFLM HGLATPRIIL
AKGTYGFDLS QPIGLLIASV FAAVSALPLN ERTAQAVLRS QIWLRGGLVA LLVVWGVASL
VPGLTALSDP APPRGAGLGG FELVGVALYA AATAMMFQLH RRRPAAMLVS LVTAYALLAE
AMIAGMSRHN WHLSWWLWHV LLTVAFVFVA YSAHLQFRRE GSSAGLFDSV ALSATVRKIR
AEYEDALEEL VGHIRRRAES RVPVATRLAG KFGLTEGQAA VLDRAGEALA NERELSERLA
ALVDTGNQAR VGLPERELLT RALDRVRQAY GDVRITLVSE GRVAMGSGEY GPGDFPGNRP
VLLDRTAVHP LTVKGQLAGA LEVPVGRTPQ DEALAATLAS QLSLSLENAR LYRELSTLFR
QYMSPDVANS LLADPRTAAL GGELVELTAL FADLKGFTSF SERATPGEIV EMLNRYHTAA
VPIILGNGGT IVQFVGDALL ALFNAPAPQP GHAAAAARAA LAMQEAAEEI CAGTPGYPRF
RIGINTGLAL VGNIGSPELR GFNAMGDCVN VAARLEGVAE PGTVVIGQST LDLITPRPRV
RSLGELALKG KEKPVHAYVL SGLS