Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8980 |
Symbol | |
ID | 8672322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 9927875 |
End bp | 9929929 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | Adenylate cyclase family 3 (some protein contain HAMP domain)-like protein |
Protein accession | YP_003344354 |
Protein GI | 271970158 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCGACGA ACGACCTCAC GAGCACGTCA GCCGAGGGAC GCGTCAGGTC AGAGCCGTAT CTCCCGCCGG CGACCCAGCC GGTCCGCGCG GTGGTCTGGG TGATCCACCT GGCCCTGCCG ATGCTGGGAC TCTGGCTGCT GCTGGCCAAC CACGACCACC TGAACATCGA GTGGCACGAC AACCCCAGCC ATTTCTGGCT GATCATCGCC GTGGCGGGGA TCAACCTGGT CCTGGGCGCC ATGATCGGCC AGGCGTCGGC CCGGCGGGCG GACGCCCGGC TGCTGCTGGT CTCGCTGGTC TTCCTGAGCA GCGCGGGCTT CTTCCTGATG CACGGCCTGG CGACCCCCCG GATCATCCTC GCGAAGGGAA CCTACGGGTT CGACCTCTCC CAGCCGATCG GTCTCCTCAT CGCCTCGGTC TTCGCGGCCG TCTCGGCGCT GCCGCTGAAC GAGCGGACGG CCCAGGCCGT GCTCAGGTCG CAGATCTGGC TGCGCGGCGG ACTCGTCGCG CTGCTCGTCG TGTGGGGAGT CGCCTCGCTG GTGCCCGGCC TCACCGCGCT GAGCGACCCG GCTCCCCCGC GGGGCGCCGG TCTCGGCGGG TTCGAGCTGG TCGGGGTCGC CCTGTACGCG GCGGCGACCG CGATGATGTT CCAGCTCCAC CGCAGGCGCC CCGCCGCCAT GCTGGTCAGC CTGGTCACCG CCTACGCCCT GCTCGCCGAG GCGATGATCG CCGGGATGTC GCGCCACAAC TGGCACCTGT CGTGGTGGCT GTGGCACGTG CTGCTGACCG TGGCCTTCGT GTTCGTCGCC TACAGTGCCC ACCTGCAGTT CCGGCGGGAG GGCTCCAGCG CGGGGCTGTT CGACTCGGTG GCGCTGTCGG CGACCGTACG GAAGATCAGG GCCGAGTACG AGGACGCCCT GGAGGAGCTC GTCGGCCACA TCCGGCGGAG GGCCGAGAGC AGGGTCCCGG TCGCGACCCG GCTGGCGGGC AAGTTCGGGC TCACCGAGGG CCAGGCGGCG GTGCTCGACC GGGCCGGCGA GGCGCTGGCC AACGAGCGGG AGCTGTCCGA ACGGCTCGCC GCGCTGGTGG ACACCGGCAA CCAGGCCCGC GTGGGACTGC CCGAGCGCGA GCTGCTGACC CGGGCCCTGG ACCGCGTGCG GCAGGCGTAC GGCGACGTGC GCATCACGCT GGTGTCGGAG GGGCGGGTCG CCATGGGCTC CGGGGAGTAC GGCCCCGGCG ACTTCCCGGG GAACCGGCCC GTCCTGCTGG ACAGGACGGC CGTCCACCCG CTGACCGTGA AGGGACAGCT CGCCGGGGCG CTGGAGGTGC CGGTGGGCAG GACCCCGCAG GACGAGGCGC TCGCCGCCAC GCTGGCGAGC CAGCTGTCCC TCTCCCTGGA GAACGCCCGG CTCTACCGGG AGCTGTCCAC CCTGTTCCGG CAGTACATGT CCCCGGACGT GGCGAACTCC CTGCTGGCCG ACCCGCGGAC GGCGGCGCTC GGCGGCGAGC TGGTCGAGCT GACGGCCCTC TTCGCCGACC TGAAGGGCTT CACCAGCTTC TCCGAGCGGG CCACGCCTGG AGAGATCGTC GAGATGCTGA ACCGCTATCA CACGGCGGCC GTGCCCATCA TCCTCGGCAA CGGGGGCACG ATCGTGCAGT TCGTGGGGGA CGCGCTGCTG GCGCTGTTCA ACGCGCCCGC CCCGCAGCCG GGACACGCCG CCGCCGCGGC GAGGGCGGCG CTGGCCATGC AGGAGGCGGC CGAGGAGATC TGCGCCGGAA CCCCGGGCTA CCCCCGGTTC AGGATCGGGA TCAACACCGG GCTCGCGCTG GTCGGCAACA TCGGCAGCCC CGAACTGCGC GGGTTCAACG CGATGGGCGA CTGCGTGAAC GTGGCCGCCC GGCTGGAAGG CGTCGCCGAA CCCGGTACCG TCGTGATCGG CCAGAGCACC CTCGACCTGA TAACCCCCCG CCCCAGGGTC CGCTCCCTGG GCGAGCTCGC GCTCAAGGGC AAGGAGAAGC CCGTCCACGC ATACGTGCTG TCCGGTCTGT CGTAG
|
Protein sequence | MSTNDLTSTS AEGRVRSEPY LPPATQPVRA VVWVIHLALP MLGLWLLLAN HDHLNIEWHD NPSHFWLIIA VAGINLVLGA MIGQASARRA DARLLLVSLV FLSSAGFFLM HGLATPRIIL AKGTYGFDLS QPIGLLIASV FAAVSALPLN ERTAQAVLRS QIWLRGGLVA LLVVWGVASL VPGLTALSDP APPRGAGLGG FELVGVALYA AATAMMFQLH RRRPAAMLVS LVTAYALLAE AMIAGMSRHN WHLSWWLWHV LLTVAFVFVA YSAHLQFRRE GSSAGLFDSV ALSATVRKIR AEYEDALEEL VGHIRRRAES RVPVATRLAG KFGLTEGQAA VLDRAGEALA NERELSERLA ALVDTGNQAR VGLPERELLT RALDRVRQAY GDVRITLVSE GRVAMGSGEY GPGDFPGNRP VLLDRTAVHP LTVKGQLAGA LEVPVGRTPQ DEALAATLAS QLSLSLENAR LYRELSTLFR QYMSPDVANS LLADPRTAAL GGELVELTAL FADLKGFTSF SERATPGEIV EMLNRYHTAA VPIILGNGGT IVQFVGDALL ALFNAPAPQP GHAAAAARAA LAMQEAAEEI CAGTPGYPRF RIGINTGLAL VGNIGSPELR GFNAMGDCVN VAARLEGVAE PGTVVIGQST LDLITPRPRV RSLGELALKG KEKPVHAYVL SGLS
|
| |