Gene Sros_8971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8971 
Symbol 
ID8672313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9916224 
End bp9918095 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003344345 
Protein GI271970149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGGC GGCTGGGGCG GCGGCTGGGG CGGCGGCTGG TGGTGGTAGC AAAGTCAGAC 
GAGAACCGGC GGGTCACCCG CCGGTTCTCC TTTGCGACCC CCTCGCCGGA CGGAGCCGGA
CCGGTAGGGG ACCTCCCGTC CCCGATCGCG CCGGCGGTCT CCATCCGGGA CGCCTTCCGG
CGGTTCTGGC CCTGCACCCG CGGCGTCCGC AGGTTTTTCG TGGTCGGCGT CGTGCTGGCG
ATCGTGGCGG CCCTCTGCGA GGTCAGCGCG ATCTGGCTGT TCGGGCGCAT CACCGACGAG
GTCCTCAGCG ACCAGAACAT GGGAGCGTTC TGGACACCCG CGTTCACCTG GCTCGGCCTC
GTGGTCATCG CGGGCCTGGC CTCCTTCGTG GGTTCCTACG CCACGGCCCT GGGCGGGGAG
CGCTTCCTGC TGCGGTTACG GGACAGGGTG TTCTCCCACA TCCAGACGCT CACCCCCGAC
TTCTTCGACA ACCGCCGGCT GGGCGACCTG ATGGCCCGGC TCACCGACGA CATCGAAGCC
ATCGAGGAAC TGGTCGGCTC CGGCGTGGTC CGGCTCCTCA CGACGGTCGC CAGCGTGGTC
TTCTTCGCCG GGGCGGCCTT CTACATCCGG TGGGATCTCG CGCTGGTGAC GTTCGCGATG
GTCCCGGCGT TCCTGATCGT CTCCAAGGTT TTCGCGTCGA AGTTCAGGAC CGTCGCCGCC
CGGGAGCGGC TCAGCAACGG AGCCATGAAC AGCGTCATCG AGGAGGGCCT GGCCAACCAG
TCCCTCGTCC AGGCCTACAA CCGCCAGGAG GCCGAGGCGG ATCGGCTGCA CGCCGAGGGC
CACACCTGGC TACGGGCCAA CGTGTCCCAG GCCCGGCTGT CCGCGCTGTA CGGGCCGGTC
GTCCAGGTCA TCGAGACCAT CTGCCTGCTG GTCGTCATCG GCTTCGGCGC GTGGGAGATC
GCGGCCGGCC GGCTCACCAT CGGCGGGCTG CTCGCCTTCG CCGCCTACCT CGCCTACCTC
TATCCGGCGG TGCAGAGCCT CGGGCAGATC GCGCTCACCG TCTCCGAGGC CGCGGCGGGC
TCCGACCGCG TCATCGAGAT CCTGCGGACC CGGCCCGCTG TCACCGACCG GGCCGGGGCG
GTTCCCATGG CCGGGCGGAG CCGTGGCCGG ATCGAGTTCG CCGAGGTCGG CTTCACCTAT
CCGAACCGGA CCAGTCCCAC GCTGCGGAAT CTGTCCTTCC GCGCGGAGCC GGGCGAACTG
ATCGTCTGCA CCGGGCCCAG TGGCGCGGGC AAATCCACCC TCACCAAACT CCTGCTGCGG
TTCTACGACC CCACCGCCGG GCGCATCCTT CTCGACGGAG TCGACATCCG GGACCTGCCG
CGCCGGTCGC TGCGCGACAA CATCACCATC CTCCAGCAGG AGAACCTGCT CTTCTCCGGG
ACCGTGCGCG ACAACATCGC CTACGGCCGT CCCGGCTCAA GCATGGACGA CATCGTCCGG
GCCGCCGTCC TGGCGGACGT GCACGACTTC ATCGGCACGC TCCCCCGGAA ATACGACACG
CCCATCGGCC AACGCGGCCG GCTCCTGTCC GGCGGGCAGC GCCAGCGCAT CGCCATCGCC
CGGGCGATCC TGCGCGACGC CCCGGTGCTC GTGCTCGACG AACCGATGAC CGGACTCGAC
TCCCTCACCG CGGCACGGAT CATGGAGCCT CTCCGGCTGC TCATGTCCGG CCGCACGACC
ATCCTCATCA CCCACGATCT CCGCCTCATC CCCGAAACGG CGCACACGAT CGTCCTCGGC
GACGCGCGGA GCCCGGGCCG TACGGAGGTC AGGCTCTCCA GGCGCCGCAG CGCGGCCCCT
CGCCCGGTCT GA
 
Protein sequence
MRRRLGRRLG RRLVVVAKSD ENRRVTRRFS FATPSPDGAG PVGDLPSPIA PAVSIRDAFR 
RFWPCTRGVR RFFVVGVVLA IVAALCEVSA IWLFGRITDE VLSDQNMGAF WTPAFTWLGL
VVIAGLASFV GSYATALGGE RFLLRLRDRV FSHIQTLTPD FFDNRRLGDL MARLTDDIEA
IEELVGSGVV RLLTTVASVV FFAGAAFYIR WDLALVTFAM VPAFLIVSKV FASKFRTVAA
RERLSNGAMN SVIEEGLANQ SLVQAYNRQE AEADRLHAEG HTWLRANVSQ ARLSALYGPV
VQVIETICLL VVIGFGAWEI AAGRLTIGGL LAFAAYLAYL YPAVQSLGQI ALTVSEAAAG
SDRVIEILRT RPAVTDRAGA VPMAGRSRGR IEFAEVGFTY PNRTSPTLRN LSFRAEPGEL
IVCTGPSGAG KSTLTKLLLR FYDPTAGRIL LDGVDIRDLP RRSLRDNITI LQQENLLFSG
TVRDNIAYGR PGSSMDDIVR AAVLADVHDF IGTLPRKYDT PIGQRGRLLS GGQRQRIAIA
RAILRDAPVL VLDEPMTGLD SLTAARIMEP LRLLMSGRTT ILITHDLRLI PETAHTIVLG
DARSPGRTEV RLSRRRSAAP RPV