Gene Sros_8953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8953 
Symbol 
ID8672295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9899973 
End bp9901997 
Gene Length2025 bp 
Protein Length674 aa 
Translation table11 
GC content72% 
IMG OID 
Productreductase 
Protein accessionYP_003344327 
Protein GI271970131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGG GGGAACTGCA GGTCCTGGGC GCCTGCCCGC TGGACTGCCC GGACACGTGC 
TCGTGGGTGG TGACCGTCCG GGACGGCGAG GCCGTCAAGA TGCGCGGCAA CCCCGACCAC
CCCTATACCC GCGGCGCGCT CTGCGTGAAG GTCAACCGCT ACCTTGAGCA CACCCGGGCG
CCCGACCGCA TCCTCCACCC GATGCGCCGG GTCGGCCCCA AGGGGTCCGG CCGGTTCGAG
CGGATCAGCT GGGACGAGGC CCTGGAGGAG ATCTCCGTAC GGCTGCGCGG GATCATCGAC
GAGCACGGCG GCGAGGCGAT CTGGCCGTAT CTGGGCACCG GCACGCTGGG CTACGTCCAG
GGGTCCGAGG GCATGGCGGG CCGGCGGTTC TGGAACGTGC TCGGCGCCTC CAAGCACTTC
CTGAACATCT GCTCGACGGC GGGCAACATC GGGCTGGCAC GGACCAACGG CACGGCCGGC
GGGATGGACC CCGAGACGTT CGCCCTGTCG AAGCTGATCC TGCTCTGGGG CACCAACACG
CTGACCAGCG GGCACCACCT GTGGAAGTTC ATCCAGGAAG CCCGCGCGGC CGGGGCGCAC
GTGGTGGCGA TCGACCCGAT CCGCACCCGG ACCGCCGAGC AGGCCGACGA GCACCTGCCG
ATCCGGCCCG GCACCGACGC GGCGCTGGCC CTCGGGCTGC TGAACGTGGT CCTCTCCGAG
GGCGCGGAGG ACCGCGACTA CCTGGAGAAC CACACGAGCG GCTGGGAGGG GTTCCGCGCG
GAGATCCTGC GCCACCCGCC GGAGCGCGTG GCGGAGATCA CCGGGCTGCC CGAGTCCGAC
ATCCGGGCCC TGGGCGTACG GCTGGCGCAC ACCCGGCCCA CCGGCATCCG GGCCACGATG
GGCATCCAGC GGCACGCGGG CGGCGGCACC GCGATGCGCA CGATCGCCGC CATCCCCGGG
GTGACCGGCG ACTGGCGCCG CCCCGGCGGC GGGGTCGCCT ACTCCACCAC CGCCTACTTC
CACCTGAACA TCGACAGCCG CGAGGACCTG CTCGCCGCGC CGGTCAGGCA GCTCACGATG
ACCCGGCTGG CCGAGGGGCT GGACGAGTCG GTGAAGTGCC TGTGGGTGTA CGCCGCCAAC
CCGATGGGCT CCACCTCCGC CCAGGAGCGC GTCCGCGAGA AGCTGCTGCG CGAGGACCTG
TTCACGGTCG TGATGGAGCA GTTCCCTACC GACACCGTGG ACTACGCCGA CATCGTCCTG
CCGGCGACCA TGCAGACCGA GCACACCGAC CTGCACGCCG GTTACGGGCA CATGTATCTG
ATGTGGAACG AGCCCGCCGT CGAGCCGCCG GGCGAGTGCC TGTCCACCAT GGAGACGTTC
CGGCGCCTGG CCAGACACAT GGGCCTGACC GAGCCGTCGC TGTACGACTC GGACCTGGAG
CTGGCCGAGC AGTTGCTCGC CTCGGGGCAC CCGTCGCTGG AGGGCGTAAC GGTCGACCGG
CTGCGCAAGG AGGGCTGGGT CCGGCTCAAC GTGCCGCAGC CGTTCGTGCC CTTCGCCGAC
GGCTTCCCGA CGCCCTCGGG GAAGCTGGAG TTCGGTCCGG GGCCGGCCTA CGTCCCCTCG
CACACGGCAT CCGCCGAGCG CGGGCCGTAC CCGCTGGCGC TGATCACCCC GGCCTCCCAC
ACGTTCCTCA ACACCACCTT CGGCAACAAC CCCGAGCTGC TGCGGCGCTC GAAGGGGCCC
TTGATCCTGG TCAGCCCGGC GGACGCCGCC CAGCGGGGGC TGAGCGACGG GCAGCGGGCG
CGGGTGTTCA ACGACAACGG CGAGTTCGAG GCCGTGGTGG AGGTCAGCGA CAGGGTACGG
CCCGGCGTGG TGGCCTCCAC CAAGGGGCAC TGGCGCAAGC TGAGCCCCGG CGGCGCGACG
GTGAACGCCG TGGTGGACGA GCGCGACGCC GACATGGGCC GGGGCGCCGT CTACCACGAC
AACCTGGTCG AGCTCAGCCC GTGTGCTTCT CGACGAAGGA CGTGA
 
Protein sequence
MSLGELQVLG ACPLDCPDTC SWVVTVRDGE AVKMRGNPDH PYTRGALCVK VNRYLEHTRA 
PDRILHPMRR VGPKGSGRFE RISWDEALEE ISVRLRGIID EHGGEAIWPY LGTGTLGYVQ
GSEGMAGRRF WNVLGASKHF LNICSTAGNI GLARTNGTAG GMDPETFALS KLILLWGTNT
LTSGHHLWKF IQEARAAGAH VVAIDPIRTR TAEQADEHLP IRPGTDAALA LGLLNVVLSE
GAEDRDYLEN HTSGWEGFRA EILRHPPERV AEITGLPESD IRALGVRLAH TRPTGIRATM
GIQRHAGGGT AMRTIAAIPG VTGDWRRPGG GVAYSTTAYF HLNIDSREDL LAAPVRQLTM
TRLAEGLDES VKCLWVYAAN PMGSTSAQER VREKLLREDL FTVVMEQFPT DTVDYADIVL
PATMQTEHTD LHAGYGHMYL MWNEPAVEPP GECLSTMETF RRLARHMGLT EPSLYDSDLE
LAEQLLASGH PSLEGVTVDR LRKEGWVRLN VPQPFVPFAD GFPTPSGKLE FGPGPAYVPS
HTASAERGPY PLALITPASH TFLNTTFGNN PELLRRSKGP LILVSPADAA QRGLSDGQRA
RVFNDNGEFE AVVEVSDRVR PGVVASTKGH WRKLSPGGAT VNAVVDERDA DMGRGAVYHD
NLVELSPCAS RRRT