Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8943 |
Symbol | |
ID | 8672281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 9878476 |
End bp | 9880869 |
Gene Length | 2394 bp |
Protein Length | 797 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | cation-transporting ATPase, E1-E2 type |
Protein accession | YP_003344318 |
Protein GI | 271970122 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGAGGAC CCACACGAAT CTCGGGGGGG GGACGCGTGG AGCAGCCGGC GGAGCAGGGG CTGACCACCG CGGAGGTCGC CGAGCGGGTG GCGCGGGACC AGGTCAACGT GGTCCGGCGC CGGTCGAGCA GATCGCTTCC GGCGATCATC CGGGCCAACG TCCTCACCCT GTTCAACGCG GTGATCGGCG TCCTGTGGAT TCTGATCATG ATCTTCGGGC AGTGGCAGGA CGGGCTCTTC GGCGCGGTGG TGGTGGCCAA CTCGGCGATC GGCATCGTCC AGGAGCTCCG CGCCAAACGC ACCCTGGACC ACCTCGCCGT CGTCAACGAG GCCCCCGTCA AGGTCCGCCG GGACGGCGCC GACACCTGGA TCCCACCCCG GCGGATCGTG CTCGGCGACC TCATCCTGCT CGCCTCCGGC GACCAGCTCC AGGTCGACGG CCGGGTGGTG GGCACCGACG GGCTGGAGGT GGACGAGTCC CTGCTCACCG GTGAGGCCGA CCCCGTCCAC AAGCGCCCCG GCGACCAGGT GCTCTCCGGC AGCTTCGTCG TCGCCGGCGC CGGCTCGTAC GTCGCGACCG AGGTGGGCGG CGACGCCTAC GCGGCCAGGC TCGCCGACGA GGCCAGCAAG TTCAACCTGT CCCACTCGGA GCTGCGCGCC GGCGTCAACA GGTTCATCAA ATACATCACC TGGCTGATCG TCCCGATCGG CGCGCTGCTC CTCTGGAGCC AGGTCAGCAG GACGAGCGAC TTCGGCCAGG CCATCACCGG CGCGGTGGCG GGCATCGTCA CCATGATCCC CGAAGGCCTG GTCCTGATGA CCAGCATCGC CTTCGCCGTC GGGGTGATCC GGCTGGGCAG GCGCCGCTGC CTGGTCCAGG AGCTGCCCGC CATCGAGGTC CTGGCCCGGG TGGACGTGCT CTGCCTGGAC AAGACCGGCA CGCTCACCGC GGGCGGCATG AGCCTCGACC GGGTGCGCCC GCTCCGCGAC GACCTGCCCG TCGACGAGGC CCTCAGCGCG CTGGCCCACC TGGACCCGGA CCCCAACCCC ACCGCCCAGG CCGTCCGGTC CGCATACCCC GACCCTCCCG GCTGGAGCAC CGGCCTCAAG GTGCCCTTCT CCTCGGCCCG CAAATGGAGC GGGGCGGAGT TCGCCGGGCA CGGCGCCTGG GTGCTCGGCG CCGCCGACGT CCTGCTCACC CCGGGCACCC CGGAGTACGA CGAGGCCGAG GAGACGGCCG CCACCGGCCT CCGCGTGCTC GCCCTGGTCC GGGTCGCCTC ACTGCGGGAC CCCGACGACC TCGGCCCCGT CGAGGCGGCG GCCGTCATCG CCCTCAAGCA GCGGATCCGC CCCGAGGCGG CCGCCACCCT CGGATACTTC GCCCAGCAGG GCGTCACCAT AAAGATCATC TCTGGCGACA ACCCCGAGTC GGTCTCGGCC ATCGCCCTGT CCCTCGGCGT CCCCGGCGGG GACCACGCGG TGGACGCCCG CGTCCTGCCG GAGAACGACC CCGGGAAGCT GGCGGAGATC CTGGACGCCA ACACCGTCTT CGGCCGGGTC ACCCCGCACC AGAAACGCTC GTTCGTCGGC GCCCTCCAGT CACGCGGTCA CACGGTTGCG ATGACCGGCG ACGGCGTCAA CGACGTGCTC GCGCTCAAGG ACGCCGACCT CGGCGTGGCG ATGGGCTCGG GCAGCGGCGC CGCCCGGTCG GTCGCCCAGA TCGTGCTGAT GGACGACGAC TTCGCCGGCC TGCCCGCGGT GGTGGCGGAG GGCCGCCGGG TCCTGGCCAA CATCGAGCGC GTCTCCACCC TCTTCCTCAC CAAGACCTTC TACGCCATCG TCCTGTCCCT GCTCACCGGC GTCGTCGGGC TCGCCTTCCC GTTCGCCCCC CGGCACTCCA CCCTGGTCAA CGCGCTGACG ATCGGCATCC CGGCGTTCTT CCTGGCACTC GCGCCGAGCA GCGAACGGGC CAGGGCCGGC TTCGTGCCAC GCGTGCTCCG GCTGGCGGTC CCCGCCGGAG TCATCTGCGC GATCGCCGTC TACCTGTCGT ACTGGGCCGC CCAGACCGGC TCCTCCACCC TGGAGGAGGA CCGCACCTCA GCGGTGATCA CGTTGTTCGT CACCACGTGG TGGGTGCTGG TGCTGATCGC CAGGCCGTAC GTATGGTGGC GCGTCGCGCT GGTGACCTCC ATGGCCGCGC TGTTCGCGCT CGCCCTCGCC GCGCCGCTCA CCCGGGACTT CTTCGCGCTC GCCCCCGGCG ACCTGAGCAA CGACCTCGTC GCGGCCGGGC TCGGGGTGGC CGGCGTGGCC GCGCTGACGG CAGTTTTCAA GATCATGCGA TCACCCGACA TATCGCCGGG TCAGGGCCGG TCAAACGATA CCCTTGAGTC ATGA
|
Protein sequence | MGGPTRISGG GRVEQPAEQG LTTAEVAERV ARDQVNVVRR RSSRSLPAII RANVLTLFNA VIGVLWILIM IFGQWQDGLF GAVVVANSAI GIVQELRAKR TLDHLAVVNE APVKVRRDGA DTWIPPRRIV LGDLILLASG DQLQVDGRVV GTDGLEVDES LLTGEADPVH KRPGDQVLSG SFVVAGAGSY VATEVGGDAY AARLADEASK FNLSHSELRA GVNRFIKYIT WLIVPIGALL LWSQVSRTSD FGQAITGAVA GIVTMIPEGL VLMTSIAFAV GVIRLGRRRC LVQELPAIEV LARVDVLCLD KTGTLTAGGM SLDRVRPLRD DLPVDEALSA LAHLDPDPNP TAQAVRSAYP DPPGWSTGLK VPFSSARKWS GAEFAGHGAW VLGAADVLLT PGTPEYDEAE ETAATGLRVL ALVRVASLRD PDDLGPVEAA AVIALKQRIR PEAAATLGYF AQQGVTIKII SGDNPESVSA IALSLGVPGG DHAVDARVLP ENDPGKLAEI LDANTVFGRV TPHQKRSFVG ALQSRGHTVA MTGDGVNDVL ALKDADLGVA MGSGSGAARS VAQIVLMDDD FAGLPAVVAE GRRVLANIER VSTLFLTKTF YAIVLSLLTG VVGLAFPFAP RHSTLVNALT IGIPAFFLAL APSSERARAG FVPRVLRLAV PAGVICAIAV YLSYWAAQTG SSTLEEDRTS AVITLFVTTW WVLVLIARPY VWWRVALVTS MAALFALALA APLTRDFFAL APGDLSNDLV AAGLGVAGVA ALTAVFKIMR SPDISPGQGR SNDTLES
|
| |