| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8934 |
|---|
| Symbol | |
|---|
| ID | 8672272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 9868512 |
|---|
| End bp | 9870143 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | ABC-type oligopeptide transport system periplasmic component-like protein |
|---|
| Protein accession | YP_003344309 |
|---|
| Protein GI | 271970113 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTTA CTAAGGGCGC ACGGATCACC GCCGGCACCG CGCTGCTCGC TCTGGGGCTG
GCCGCGTGCG GCAGCCAGGG CTCCACGGGC GGTGGGACGG CCTCCGCCGA CCAGCCCGTG
CGCATGGAGC TCGGCGAGCC CCAGAAGCTC TTCTACCCCG GTGACACCAC CGAGTCCGAG
GGCTCCGAGG TGCTGGCCGC CGTCTTCGCT CCGCTGGTGA GCTACGACGA GAACAAGCAG
GTCGTCAACG ACGTCGCCGA GTCGATCAAG ACGACCGACA ACAAGACGTG GACGATTGAG
CTCAAGCCGG GCTACACCTG GCACAACGAC GAGCCGCTGG TCGCGCAGAA CTACGTCGAC
GCGTGGAACT TCGCCGCCAA CCAGGACAAC GCCCAGGGTG CCAACGGCTT CTTCAGCCGC
GTCGAGGGCT GGGCCGACCT GAACCCGGGC GAGGGCAAGA CCGTCTCCAC CAAGGAGATG
AAGGGCCTCA AGGCCGTCGG CGAGAGCACG CTCAAGGTCA CCCTGACCAA GCCGTTCTCG
CAGTTCAAGA CGATGCTGGG CTACACGTCG TTCTACCCGC TGCCCAAGGC CGCCTTCGGT
GAGGACGGCA AGGTCACCGA GGCGTACGCC AAGCAGCCGA TCGGGCAGGG CTACTTCAAG
TTCGACAAGC CCTACAACAA GGGCACCGAC CAGGCGATCG ACCTGACCCG GTACGACAAG
TTCCCCGGGG ACAAGCCGAA GTTCGACAAG CTCCAGTTCA AGCTCTACGC CAGCGCCGAG
ACCGCGTTCA ACGACCTGCG CGCGGGCAAC CTGGACGTCC ACGACTCGCT GCCCCCCTCG
GCGATCGCCA GCGCCAAGGC CGAGCTCGGC GAGCGCTACA TGGACGAGGC CGACGCCGGC
GTCGGCTACA TCGGCTTCCC GATGCAGTAC AACAAGACCT ACGCGAACGT GAAGGTCCGC
GAGGCCATCT CCCTGGCCAT CGACCGCAAG ACGATCGCCG AGACGGTCTT CTCGGGCACC
CGCGCCCCGG CCGACGACTT CATCAACCCG CTGCTCGACG GCTACCGTCC GGGCGCCTGC
GCGGTCTGCA CCTACGACCC GGCCAAGGCC AAGACGCAGT ACGCCGACAA CGGTGGCCCG
AAGACGCTGG AGCTGGGCTA CAACTCCGAC GGCCCGCACA AGGAGTGGAT CGAGGCGGTC
GCCAACAACC TCCGCGCCAA CCTCGGCGTC CAGGTCACGG TGAAGCCGTT CGAGAAGTTC
GCCTCGATCC TCGACGAGCT CGACAAGAAG ACCTACGGCG GCATGTTCCG CATGGGCTGG
GCGATCGACT ACCCGTCCGC GGAGAACTAC CTGACCCCGG TCTTCTCCAC CGTCGCGATC
AAGACCGGCT CCAACTACGC CGGCTGGTCC AACAAGGCGT TCGACGACCT CCTCGCCAAG
GGCGACAGCG CCGCGACGCA GGCGCAGGGC CTGAAGTACT ACCAGCAGGC CGACGACATC
CTGATCAAGG AACTGCCGTA CATCCCGGTG TACTTCTACC GGACGAACGC CGCGTTCTCC
CAGCATGTCA AGGGCATCAA GATCAACCTC CTCAACCAGG TCGAGTGGGC CCAGGTGGAG
AAGGTCGCCT GA
|
|---|
| Protein sequence | MRVTKGARIT AGTALLALGL AACGSQGSTG GGTASADQPV RMELGEPQKL FYPGDTTESE
GSEVLAAVFA PLVSYDENKQ VVNDVAESIK TTDNKTWTIE LKPGYTWHND EPLVAQNYVD
AWNFAANQDN AQGANGFFSR VEGWADLNPG EGKTVSTKEM KGLKAVGEST LKVTLTKPFS
QFKTMLGYTS FYPLPKAAFG EDGKVTEAYA KQPIGQGYFK FDKPYNKGTD QAIDLTRYDK
FPGDKPKFDK LQFKLYASAE TAFNDLRAGN LDVHDSLPPS AIASAKAELG ERYMDEADAG
VGYIGFPMQY NKTYANVKVR EAISLAIDRK TIAETVFSGT RAPADDFINP LLDGYRPGAC
AVCTYDPAKA KTQYADNGGP KTLELGYNSD GPHKEWIEAV ANNLRANLGV QVTVKPFEKF
ASILDELDKK TYGGMFRMGW AIDYPSAENY LTPVFSTVAI KTGSNYAGWS NKAFDDLLAK
GDSAATQAQG LKYYQQADDI LIKELPYIPV YFYRTNAAFS QHVKGIKINL LNQVEWAQVE
KVA
|
|---|
| |