| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8933 |
|---|
| Symbol | |
|---|
| ID | 8672271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 9867467 |
|---|
| End bp | 9868390 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter permease protein |
|---|
| Protein accession | YP_003344308 |
|---|
| Protein GI | 271970112 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGTT ACATCATCAG GCGCCTGATC CAGGCGATAC CTGTCCTGCT GGGCGCCACC
CTGCTCATCT ACGCCATCGT CTTCGCGCTG CCCGGTGACC CCATCGCGGC GCTGGCGGGC
GAGAAGCGGA TGGACCCCAA CATCGTCACC ATCCTGCGGG AGCAGTACCA CCTGAACGAC
CCGTTCCTGG TGCAGTACTG GTACTACCTG TCGGGCCTGT TCGGCGGGGA CTTCGGCACC
ACCTTCGCCG GGGTCCCGGT CACGGACATC ATGGCCGGCA AGTTCCAGGT GACCATCAAC
CTGGCGATGA CGGCCCTGGT CATGGAGGCG GTCATCGGAG TCGGCCTCGG CCTCTACGCG
GCGCTGCGCC ACGGCAGGGC CCAGGACTCC ATGGTCCTCG CGTCCACGCT GGTGCTGATC
TCCATTCCCA CGCTGGTCAC CGGTTTCGTG CTCCAGCTGC TCCTGGGGGT CAAGGTCGGC
CTCTTCCCCG TCGCGGGCGT CACGGACGGC TGGCGCAGCT ACCTGCTGCC CGGCTTCGTG
CTCGCCGGGA CGTCGATCGC CTACCTCACC CGGCTCACCC GGACCAGCCT CGTGGAGACC
CTGCGGGCCG ACTACATCCG CACCGCGGTG GCCAAGGGCC TGCCCCGGCG CCGGGTCGTC
GGGCGGCACG CGCTGCGCAA CGCGCTGATC CCGCTGATCA CCTATCTCGG CGCCGACCTC
GGCACGCTGA TGGGCGGTGC CGTGATCACC GAGACGATCT TCAATCTGCC CGGTATCGGC
CAGCAGCTCT TCAGCTCGGT CTACCTGCGC GAACAGTCGG TGGTCGTCGG CATCGTGACC
GTGCTGGTGC TGATCTACAT CCTGGCCAAC CTGGTCGTCG ACCTGCTCTA CGCCGTGCTC
GACCCGAGGA TCCGTTATGA GTGA
|
|---|
| Protein sequence | MSRYIIRRLI QAIPVLLGAT LLIYAIVFAL PGDPIAALAG EKRMDPNIVT ILREQYHLND
PFLVQYWYYL SGLFGGDFGT TFAGVPVTDI MAGKFQVTIN LAMTALVMEA VIGVGLGLYA
ALRHGRAQDS MVLASTLVLI SIPTLVTGFV LQLLLGVKVG LFPVAGVTDG WRSYLLPGFV
LAGTSIAYLT RLTRTSLVET LRADYIRTAV AKGLPRRRVV GRHALRNALI PLITYLGADL
GTLMGGAVIT ETIFNLPGIG QQLFSSVYLR EQSVVVGIVT VLVLIYILAN LVVDLLYAVL
DPRIRYE
|
|---|
| |