| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8910 |
|---|
| Symbol | |
|---|
| ID | 8672248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 9841988 |
|---|
| End bp | 9843613 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_003344285 |
|---|
| Protein GI | 271970089 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCCA AGATGATCGC GTTTGACGAG GACGCCCGGC GCGGTCTCGA GCGCGGTATG
AACCAGCTCG CGGACGCCGT CAAGGTGACC CTCGGCCCCA AGGGCCGTAA CGTCGTCCTG
GAGAAGAAGT GGGGCGCACC CACGATCACC AACGACGGTG TCTCCATCGC CAAGGAGATC
GAGCTCGAGG ACCCGTGGGA GAAGATCGGG GCCGAGCTCG TCAAGGAAGT CGCCAAGAAG
ACCGACGACG TCGCGGGCGA CGGCACCACC ACCGCCACCG TGCTCGCCCA GGCTCTCGTA
CGTGAGGGCC TCCGCAACGT CGCCGCCGGC GCCAACCCGA TGTCCCTGAA GAAGGGCATC
GAGGCCGCCG TCGAGCGCGT CTCCGAGGAG CTCTCCAAGC TGGCCAAGGA CGTGGAGACG
AAGGCGCAGA TCGCCTCCAC CGCCTCCATC TCCGCGGGCG ACCCGCAGAT CGGCGAGATG
ATCGCCGAGG CGATGGACAA GGTCGGCAAG GAAGGTGTCA TCACCGTCGA GGAGAGCAAC
ACCTTCGGCC TGGAGCTTGA GCTCACCGAG GGCATGCGCT TCGACAAGGG CTACATCTCG
CCCTACTTCG TCACCGACCC GGAGCGTATG GAGGCCGTCC TCGACGACCC GTACATCCTC
GTCGTCAACT CCAAGATCTC CGCCAACAAG GACCTGCTCC CGGTCCTCGA CAAGGTCGTG
CAGGCCGGCA AGCCGCTGCT GATCATCGCC GAGGACATCG AGGGCGAGGC CCTGGCCACC
CTGGTCGTCA ACAAGATCCG TGGCCTGTTC CGCTCGGTCG CGGTCAAGGC GCCGGGCTTC
GGTGACCGCC GCAAGGCCAT GCTGGGCGAC ATCGGCATCC TGACCGGTGC CCAGGTCATC
AGCGAGGACC TCGGCCTCAA GCTGGAGTCC ACCACGCTGG ACCAGCTCGG CCGCGCCCGC
CAGGTCATCG TCACCAAGGA CGAGACCACC ATCGTCGACG GTGGCGGCGA CGCCGAGCAG
ATCGCCGGCC GGGTCAACCA GATCCGCGCC GAGATCGACA ACACCGACTC CGACTACGAC
CGCGAGAAGC TCCAGGAGCG TCTGGCCAAG CTGGCCGGCG GCGTGGCCGT CATCAAGGCC
GGCGCGGCGA CCGAGGTCGA GCTCAAGGAG CGCAAGCACC GCATCGAGGA CGCCGTTCGC
AACGCGAAGG CGGCCGTCGA GGAGGGCATC GTCCCCGGCG GTGGCGTGGC CCTGCTGCAG
GCCGGCGCCA AGGCGTTCGA CAAGCTGGAG CTGTCCGGCG ACGAGGCCAC CGGTGCCGCG
ATCGTGAAGA AGGCTCTTGA GGAGCCGCTG AAGCAGATCG CCGTCAACGC CGGCCTTGAG
GGCGGCGTCG TGGTGGAGAA GGTGCGCAAC CTCACCCCGG GTGAGGGCCT GAACGCCGCC
ACCGGCGAGT ACGTCAACAT GTTCGAGTCG GGCATCATCG ACCCGGCCAA GGTGACGCGC
TCCGCGCTGC AGAACGCCGC TTCCATCGCG GCGCTCTTCC TCACCACCGA GGCCGTCATC
GCCGAGAAGC CCGAGAAGGC CGGAGCCGCT CCCGCCATGC CGGGCGGCGG CGACATGGAC
TTCTAA
|
|---|
| Protein sequence | MAAKMIAFDE DARRGLERGM NQLADAVKVT LGPKGRNVVL EKKWGAPTIT NDGVSIAKEI
ELEDPWEKIG AELVKEVAKK TDDVAGDGTT TATVLAQALV REGLRNVAAG ANPMSLKKGI
EAAVERVSEE LSKLAKDVET KAQIASTASI SAGDPQIGEM IAEAMDKVGK EGVITVEESN
TFGLELELTE GMRFDKGYIS PYFVTDPERM EAVLDDPYIL VVNSKISANK DLLPVLDKVV
QAGKPLLIIA EDIEGEALAT LVVNKIRGLF RSVAVKAPGF GDRRKAMLGD IGILTGAQVI
SEDLGLKLES TTLDQLGRAR QVIVTKDETT IVDGGGDAEQ IAGRVNQIRA EIDNTDSDYD
REKLQERLAK LAGGVAVIKA GAATEVELKE RKHRIEDAVR NAKAAVEEGI VPGGGVALLQ
AGAKAFDKLE LSGDEATGAA IVKKALEEPL KQIAVNAGLE GGVVVEKVRN LTPGEGLNAA
TGEYVNMFES GIIDPAKVTR SALQNAASIA ALFLTTEAVI AEKPEKAGAA PAMPGGGDMD
F
|
|---|
| |