Gene Sros_8908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8908 
Symbol 
ID8672246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9839082 
End bp9841100 
Gene Length2019 bp 
Protein Length672 aa 
Translation table11 
GC content73% 
IMG OID 
ProductSuperfamily I DNA and RNA helicase-like protein 
Protein accessionYP_003344283 
Protein GI271970087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCAC ATCAATTGGC CCCCGACATA ACCGACGACC CGGCCGAGAC CCTCGCCGCC 
GAACGCGAGC ACCTGGCCGC CTCCAGGGCC GCGCTGCGCG CCATGCGCGA GCACGCCCAG
TCCCTCTCCT CCGACGCCGC CGGAGACTGG GTCTCCCAGC AGATCCTGCA GGCGCTGCTG
GACCAGCGGG TGGCGGCGCT CGCCGACCAC TCCGGCACCC CGCTGTTCTT CGGCCGCCTC
GACCGGGCCG TGGACGACGA CCTTCCCGGC ACCATCTACG TCGGGCGCAG GCACGTCCAC
GACGAGCGCA GCCGCCCCCT GGTGATCGAC TGGCGGGCCC CGGTCTCGCG GGCCTTCTAC
CAGGCCAGCC CGTCCGATCC GATGGACGTC GCGCTCCGCC GCCGGTTCGG CTACCACGGC
GGCGACCTGA CCGCCTACGA GGACGAGCCG CTCGACCAGG GGGGCGCCCT GCAGCACAGC
AGGATCCTCA CCGAGGAGAT CGAGCGGCCC CGCTCCGGTC CGATGCGCGA CATCGTCGCC
ACCATCCAGC CCGACCAGGA CGAGATCGTC CGCTCCGAAC TGGGCCGGAC CGTCTGCGTC
CAGGGAGCCC CCGGCACCGG TAAGACCGCC GTCGGCCTGC ACCGGGCGGC CTACCTGCTC
TTCACCCACC GGGAGAAGCT CGCCCGCTCC GGCGTGATGA TCGTCGGGCC CAACCGGGCC
TTCCTGTCCT ACATCTCCTC GGTGCTCCCC GCGCTGGGCG AGGTCAAGGT CGACCAGACC
ACGGTCGCCG GGATCCTGGG CGACCACTCG GCCCCCGAGG ACCCCGCGGT CAGCGCGGTC
AAGGGCGATG CGAGGATCGC GCCGGTGCTC AGGCGCGCCC TGTGGATGCA CATCGTCAAG
CCGACCGAGG GCGTGCTGTT CACCAAGGGC GTCAACCGCT ACCGGGTGGC CGACCACGAG
GTCCGCGAGG TCGTCGCGTC ACTGCGCGGG ACCACGCGTT ACGGCCCCGG CCGGGCGGCT
CTCGCCCAGC GGCTGGCCCA CCTGGTGCTC GTCCGGATGG AGCAGCGCGG CGAGTCCCCC
GACGACCGGG TCCAGGACGC GGTGGCCCGG TCCAAGCCGG TCAAGCAGCT CGTGGAGCAG
GTCTGGCCCA AGCTGACCCC CCAGCAGGTG CTCCACCGGC TCTTCAGCGA TCCCGAGTTC
CTCGCCGCCG CGGCCAAGGA CGACCTCACC GCCGCGGAGC AGGCCATGCT CCTGTGGGCC
AAGCCGGCGA AGTCCCACCG CTCCGCGAAG TGGTCGGCGG CCGACGGCGC GCTGATGGAC
GAGCTCGGCG ACCTGATCGA GCGGACCGCC CCGCTGGGAC ATCTGGTCGT GGACGAGGCC
CAGGACCTGT CCGCGATGCA GTTGCGCGCC CTCGGCCGGC GCTGCCGTAC CGGGTCTGCC
ACCGTGCTGG GCGACCTCGC CCAGGGCACG ACTCCCTGGT CCGCCCGTTC CTGGGACGAG
GTCCTCACCC ACCTGGGCTT CGAGGACGGC GCGGTCACCG AGCTGACCCT CGGCTTCCGC
GTCCCCCGCG AGGTGCTCGA CTACGCCGCC AGGCTGCTGC CCGCCGTCGC CCCGGACCTG
GCCGCGCCCC GGTCGCTCCG GCCCGGTGCG GGCTCCCTGT CGGTACGGCC CGCCACCGAC
CCGGCCGCGT CCCTGACGCA GGCGGTGCGG GAGGCGCTCT CCCGCGAGGG CTCGATCGGC
GTCATCGTCC CGGACGCCTC GGTCGCGGCG GTGTCCGAGA GCCTGTCCCA GCTGGACCAT
CGTGTGCTGA GCCCCGACTC GGTGGAGGAG CACCGCCTCC TGGTCATCCC GGCGACCCTG
GCCAAGGGCC TTGAGTACGA CCACGTCATC GTGGTCGAGC CGGCCGACAT CGTGGACGCC
GAACCACGCG GCCTGGCCCG CCTCTACGTG GTCCTGACCC GCGCGGTCAC CTCCCTGACC
GTCCTGCACG CCAGGGAGCT CCCCGCCCTG CTCTGCTAA
 
Protein sequence
MPAHQLAPDI TDDPAETLAA EREHLAASRA ALRAMREHAQ SLSSDAAGDW VSQQILQALL 
DQRVAALADH SGTPLFFGRL DRAVDDDLPG TIYVGRRHVH DERSRPLVID WRAPVSRAFY
QASPSDPMDV ALRRRFGYHG GDLTAYEDEP LDQGGALQHS RILTEEIERP RSGPMRDIVA
TIQPDQDEIV RSELGRTVCV QGAPGTGKTA VGLHRAAYLL FTHREKLARS GVMIVGPNRA
FLSYISSVLP ALGEVKVDQT TVAGILGDHS APEDPAVSAV KGDARIAPVL RRALWMHIVK
PTEGVLFTKG VNRYRVADHE VREVVASLRG TTRYGPGRAA LAQRLAHLVL VRMEQRGESP
DDRVQDAVAR SKPVKQLVEQ VWPKLTPQQV LHRLFSDPEF LAAAAKDDLT AAEQAMLLWA
KPAKSHRSAK WSAADGALMD ELGDLIERTA PLGHLVVDEA QDLSAMQLRA LGRRCRTGSA
TVLGDLAQGT TPWSARSWDE VLTHLGFEDG AVTELTLGFR VPREVLDYAA RLLPAVAPDL
AAPRSLRPGA GSLSVRPATD PAASLTQAVR EALSREGSIG VIVPDASVAA VSESLSQLDH
RVLSPDSVEE HRLLVIPATL AKGLEYDHVI VVEPADIVDA EPRGLARLYV VLTRAVTSLT
VLHARELPAL LC