Gene Sros_8887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8887 
Symbol 
ID8672225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9815508 
End bp9816749 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003344263 
Protein GI271970067 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.889317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGGT CGCTGCGCAA CCACAACTAC CGGCTGTTCG CGATCGGCGG GGTGGTCTCC 
AACGTCGGCG GCTGGATGCA GCGCACCGCG CAGGACCTGC TGGTGCTGGA CCTGACGAAC
GGCAGCGCCG TCGCCCTGGG AGTGACCACC GCGCTGCAGT TCCTGCCGCT GCTGCTGTTC
GGCCTCTGGG GCGGCATGCT CGCCGACCGC TACCCCAAGC GGCGACTGCT GATGGTCGCC
CAGTCGCTCA TGGGCGTGCT GGCGCTGACC ATGGGTCTGC TCGTCGTGAC CGGCAACGCG
CAGTTCTGGC ACGTCTACGT GATGGCCTTC GTCCTCGGCC TCATCTCCTG TGTCGAGGTG
CCCACCCGTC AGTCCTTCGT CGTGGAGATG GTCGGCCGCA AGGACCTGGC CAACGCCGTC
GCGCTGAACG CCTCCAGCTT CAACCTGGCC CGCGTGGTCG GTCCGGCCGT CGCGGGCGTG
CTGATCTCCG CGCTCGGCGG CACGGGCCCG ATGTTCCTGA TCAACGCGCT GTCGTTCGTC
GCCGTGCTGA GCGGCCTGGC GCTGATGCGC GCCTCGGAGC TGACCGCGCC CGATCCGTTG
CCCAGAGCCA AGGGTCAGCT CCGCGAGGGG CTGCGCTACG TGCTGGACCG TCCGGACCTG
CTGCTGCCGA TACTGCTGGT CGCCTTCGTC TCGCTGTTCA CGCAGTCGTT CTCGATGTCC
ATCGCGCTGA TGGCCCGCGG GGTCTTCGGT GCGGGCGCGT CCTCCTTCGG CCTGGCCTCC
AGCATGTTCG CGGTGGGCGC GCTGGGCGGT GCGCTCATGG CGGCCCGGCG GGTACGGCCC
AGCCGGAAGC TGCTGATCGG CGGCGCGGTG TCGTTCGGAC TGTTCCAGAT CGCCACCGGC
CTGGCCCCGT GGTACCCGCT CTACCTGCTT TTCCTCATCC CCGCCGGGGT CGCGCTGATC
TCCATCAACA CGGCCGCCAA CACCAGCGTG CAGCTCGCGT CCTCGCCGGA GATGCGCGGC
CGGGTGATGG GCATCTACGT GCTGGTGTTC ACCGGCGGCG CCCCGATCGG CGCGCCGCTG
CTCGGCTGGA TCTCCGAAAT GGGCGGCCCC CGCACGGGGG TCATGATCGG CGGGGTGCTC
ACCATCGCGG GCACCGGGGC GGCGATAATG CTGACCAGGG TGATCGGCAG GAGGTCGCGT
GCGGCTGTTC GTGGGGTTAC CGCTGCCGCA GCGGGTGCGT GA
 
Protein sequence
MFRSLRNHNY RLFAIGGVVS NVGGWMQRTA QDLLVLDLTN GSAVALGVTT ALQFLPLLLF 
GLWGGMLADR YPKRRLLMVA QSLMGVLALT MGLLVVTGNA QFWHVYVMAF VLGLISCVEV
PTRQSFVVEM VGRKDLANAV ALNASSFNLA RVVGPAVAGV LISALGGTGP MFLINALSFV
AVLSGLALMR ASELTAPDPL PRAKGQLREG LRYVLDRPDL LLPILLVAFV SLFTQSFSMS
IALMARGVFG AGASSFGLAS SMFAVGALGG ALMAARRVRP SRKLLIGGAV SFGLFQIATG
LAPWYPLYLL FLIPAGVALI SINTAANTSV QLASSPEMRG RVMGIYVLVF TGGAPIGAPL
LGWISEMGGP RTGVMIGGVL TIAGTGAAIM LTRVIGRRSR AAVRGVTAAA AGA