Gene Sros_8881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8881 
Symbol 
ID8672219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9805883 
End bp9806908 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content72% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003344257 
Protein GI271970061 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.282171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCC TGGTGACCGG AGCGTCCGGG TTCGTCGGCT CACACGCGGT TGCCGCACTT 
GTCGCCGCCG GGCACGAGCC GCTCCTCCTG GTGCGTGATC CGGAGAAGAC GAGGAAAGTC
CTGGCCGATG TCGGGGTCGA CGGCGCGGTC CCCATGCATG AGGCGGATAT CCGTGACGCG
GAATCCGTAC GGAACGCGCT TGAACGGTGT GAGGCGGTCA TTCACGCCGC CGCCGAGATC
GGGGTCGTCA GCCACGCCGG CGACCTGGCG GGGACGAACG TGGCCGGGCT GAAGAACGTC
CTCGGCCAGG CCGCCGCGCT CGGCCTCGAC CCGATCGTGC ACATCTCCAC CGTCGCGGTC
TTCGTGCCGC CGGCCGGACC CCTGATCACC GTCGAGAGCC CGCTGTCCGC CCCCAGGAAC
GCCTACGGCA GGACCAAGGT CTCCGGTGAG CGCTACGCCA GGCGGCTCCA GGAGCGGGGA
GAGCCGGTCA CCGTCGTCTA CCCGGGCGGG GTCGCCGGGC CGTACCAGCC CTCGCTCGAC
GCGCTCATGG AGGGGCTGCG CGCGGGGCTG GAGCAGGGCT GGCCGATCAC CGCGGGCGGC
GTCTGCGTCC TCGACGTCCG CGATCTGGCC ATCGTGCTCG CCCGTTGTCT GGAGCCGGGG
CGCGGGCCGC GCCGATTCAT GCTCGGCGGG CACTACCTCA CCTGGGCGGA GCTCGCAGAC
GCCTGCGACG AGGCGACCGG AGGACGCTGC CGCCGCTTCA GGGTCCCCGC CGCCGTGCTG
CGCGGCGCGG CGGCCGTGCT CGACGCCGTG AAACGGATCA GGCCGATCGA CTACCCGCTG
ACCAGGGACG CCGCCGAGAT GATGGTCACG ATGGAGCGGA CCTTCGACGC CCCCACTCTG
GAGGCGCTCG GCACGAGCCT GCGTCCGGTC CGGGAGACCA TCGCCGACTC GCTGCGCTGG
CTCGCCGAGG AAGGGCATCT CGCCCCTGGG AAGGCCGGCG TGCCGGCCGG TAAGGTCGCG
CGGTGA
 
Protein sequence
MRVLVTGASG FVGSHAVAAL VAAGHEPLLL VRDPEKTRKV LADVGVDGAV PMHEADIRDA 
ESVRNALERC EAVIHAAAEI GVVSHAGDLA GTNVAGLKNV LGQAAALGLD PIVHISTVAV
FVPPAGPLIT VESPLSAPRN AYGRTKVSGE RYARRLQERG EPVTVVYPGG VAGPYQPSLD
ALMEGLRAGL EQGWPITAGG VCVLDVRDLA IVLARCLEPG RGPRRFMLGG HYLTWAELAD
ACDEATGGRC RRFRVPAAVL RGAAAVLDAV KRIRPIDYPL TRDAAEMMVT MERTFDAPTL
EALGTSLRPV RETIADSLRW LAEEGHLAPG KAGVPAGKVA R