| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8855 |
|---|
| Symbol | |
|---|
| ID | 8672193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 9776843 |
|---|
| End bp | 9779995 |
|---|
| Gene Length | 3153 bp |
|---|
| Protein Length | 1050 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ATPase-like protein |
|---|
| Protein accession | YP_003344231 |
|---|
| Protein GI | 271970035 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0635929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATG TGCGAGTCGA ATTGCTTGGA CCATTCGAAG TCCGGAACCG CGATGGGGCC
GTGGTGGAGG TCCCTGGGAT TCGGCTGCGC GCGCTGCTGG CCGCACTCGC TCTCGAACCT
GGCCGGAGCG TCACGCGTGC GAGGCTGGTG GACTGGATCT GGGGGCAACG GCCGCCCGCG
GACGAAGTGA ATGCCTTGCA GGCGTTGGTG TCCAGGCTGC GCAGGGTGTT GCCGGACGGT
GTCATCGAGG CGGATTCCGG CGGGTATCGG CTGGCCGTGG CCCCTGATGC CGTGGACGTG
TGCCGGTTCG AGCACCTGAT CGGTCAGGCC CGTGCCGCCG AGCCCGCGGC GCGGGCGGAT
CTGCTCCGCT CGGCCTTGGC ATTGTGGCGT GGTACGGCCA TGGCGGACAT CGCGCTGCGA
GACAGCGATG CGTTCGGCGC TGCGGTCGCG CGTCTGGACG AACTCTACGT CGCCGCGCTC
GGGGATCGGG TGGATGCGGA CATCCGCCTC GGCCGTGGCT CGGAGCTGGT CTCGGAGCTG
ACCGAGCTGG TTGCCACGTA TCCGCTGCGG GAGGGGTTCG TGGCGGCCTT GATGCGAGCG
CTCGCCGAGG CGGGGCGTGG GACCGAGGCG TTGACCCTGT ACCAGCGGAC GCGCGAGCGG
CTCGCTGAGG AGTTGGGCGC CGATCCATCG GCCGAGCTCT CCGCGCTGCA CACCGCGCTG
CTCCGGGGCG AGCTGGGAGA GCGTGCGGAG AACCGCAGGA CGAACCTGCG GGCCGAGCTG
ACGAGTTTCG TCGGCAAGGA CGACGACATC TCCGCGGTCG CCGGTCTGGC CATCAAGCAC
CGGCTGGTCA CCTTGACGGG GGCGGGTGGC TCCGGCAAGA CAAGGCTGGC CACGGAGACC
GCGCGGACGA TGCTCGCCGA GCTGCCGGAT GGGGCGTGGC TGATCGAACT GGCCTCGGTG
CGGGCGGGCG GTGAGCTGGC GCAGGCCGTC CTTACCGCGA TCGGCCTGCG TGACCAGGCG
CTGCTCGGTG GCGCGCGGGG CGGGGAACCG ATGGACCGGC TCATCACCGC GGTCCGGGAG
CGCGCGATCT TGCTGATCCT GGACAACTGC GAGCACATGA TCGAGGCGGC CGCGGCTTTC
GCGGATCGGC TTCTGGGAGA GTGCCGGAGG CTGCGGATTC TGGCCACGAG CAGGGAACCG
CTCGGTATCA CCGGGGAGGT GCTGTGGCAG GTCGAGCCGC TCGCGCTGCC CGCGAAGGGA
GCGGACGCCT CCGAGTCCGG GTCCTCGCCC GCGGTGCGGC TGCTGCGGGA CCGCGCGGAT
CTGGTGCGCA AGGACATCGG CTCCGACGTG CACACCTTGT CGGCCATGGC GCGGATCTGC
CGGGCGCTCG ACGGGATGCC GCTGGCGATC GAACTGGCCG CGGCGCGGCT GCGCACCATG
TCCATCGATC AGCTGGCCCG TCGGCTCGAT GACCGGTTCC GTCTGTTGAC CGGCGGCAGC
CGTACGGCGC TTCCCCGGCA CAAGACGCTG CGCGCGGTCG TGGACTGGAG CTGGGATCTG
TTGACCGAGG CCGAACGCGG TGTGCTGCGG CGGCTCTCGG TGTTCTCCGG CGGGGCGAGC
CTGGAAGCGG CCGAACAGGT GTGCGGGGAC GAGGCGTTCG CCGGGGAGCA GGTGCTCGAC
CTGCTGACCG CGTTGATCGA GAAGTCGCTG CTGCTCGCCG ACGGCGAGGG CACGCCGCGC
TACCGGATGC TCAACACCAT CAGGGAATAC GCGGCGCACC GGCTCGCCGA AGCCGGGGAA
ACCGAGTCGG CGCACCGGGC GCACCTTGCC TACGTCACCG AGTTGGCCGA GACGGCCGAG
CCGCACCTGC GCCGGGCCGA GCAGCTGGAA TGGCTGTCCA CGCTCGAGGC CGAGCACGAC
AACATCGGCG CGGCCCTGCG CGGGGCGATC GCCGAGGGAT GGGCCCAGGA GGCGATGCGG
CTGGTCACGG CCGTGGGCTG GTACTGGTTC CTCAGCGGGC ACAGGGCCGA GGGCACCGAA
TTGAGCATCG CGGCGGCCTC GCTGCACGGT GAGGTGCCCG ACGAGGTGCG GGCGATGGCG
TACACCCTCG TGACAGTGTT CGTGACCTCC GGGCCCGGCC GCGACCAGTA TCAGGCGCGG
AAGTGGATCC ACGAGGCGCA CCGGTTCACC CAGCGCAGCG GGTATCGCAA CCCGCTGCTC
GGGTTCGTCG CGCCGCTGGA GCGGATGCTG CGGGAGCCGA CGGAGTTCCT GTCCGCGTTC
GAGCCGCTCA TCGCCGACGA CGATCCATGG GTGCGCGCGC AGGCCAGGCT CACTCGTGGC
CGATTGCGGC TCACGGTCGG CGGCGACGAG ACTGACGTGG ACGGCGACAT CGAGACCGCC
CTTGCCGAGT TCCGCACGCT GGGTGACCGG TGGGGGATCT CGTTGGCGCT GACCTACCTG
GCCGATCGGC TCGCCATGCG CGGCGAGTTC GCACGTGCGT GTGAGCACTA CGAAGAGGCG
GTCGCGGCGC TGACCGAGGT AGGCGGGACC GAGGACGTGG TCGGCCTGCG GGCGCGGCAG
GCTCAGCTGT ACTGGCTGCT CGGCGATGAG CGCTCCAGCA CGTCCGCCAT GGCCGAAGCA
CAGCGGTACG CGGGCGGGAT CGCCTGGCCG GACACGCTTG CCGACCTGGC GCTTTCGAAG
GCACAGCTGG CGCGCTGGCG CGGCGAGCCG GACAAGGCAC ACCAGCACCT GGCCGCGGCG
CGGACAACGC AGGCCGACGC GGAGCCGAAC GACTCCTTCC GCGCCAGGAC CATGGACCTG
TACGGCTACC TCGCCGAGGA TCTCGAGCAG GCCCGCGCGC ATCGGAGCGA GGCGTTCCGT
GCGGCTGTGG AGACGACGTA TCCGCCGCTG ATCGCCGAGG CGTTGATCGG GATCGCGGAT
CTCGCGCTGC GCCAGGGACA GCACGAGCAG GCCGCGCGAC TGCTCGCGGC GAGCGACGGC
GTACGCGGTA CGCCGGATCG TTCGCTGCCG GACGTTTCCA GGATCGCCGC GGACACGCGC
GATCACCTCG GTGAAACCGT GTTCGCCGAG GCGACCCGTG CCGGTCAGCG GCGGGATTGG
CGTGAGCTGG CCGAGATCAC GCTCGCTCCG TGA
|
|---|
| Protein sequence | MTDVRVELLG PFEVRNRDGA VVEVPGIRLR ALLAALALEP GRSVTRARLV DWIWGQRPPA
DEVNALQALV SRLRRVLPDG VIEADSGGYR LAVAPDAVDV CRFEHLIGQA RAAEPAARAD
LLRSALALWR GTAMADIALR DSDAFGAAVA RLDELYVAAL GDRVDADIRL GRGSELVSEL
TELVATYPLR EGFVAALMRA LAEAGRGTEA LTLYQRTRER LAEELGADPS AELSALHTAL
LRGELGERAE NRRTNLRAEL TSFVGKDDDI SAVAGLAIKH RLVTLTGAGG SGKTRLATET
ARTMLAELPD GAWLIELASV RAGGELAQAV LTAIGLRDQA LLGGARGGEP MDRLITAVRE
RAILLILDNC EHMIEAAAAF ADRLLGECRR LRILATSREP LGITGEVLWQ VEPLALPAKG
ADASESGSSP AVRLLRDRAD LVRKDIGSDV HTLSAMARIC RALDGMPLAI ELAAARLRTM
SIDQLARRLD DRFRLLTGGS RTALPRHKTL RAVVDWSWDL LTEAERGVLR RLSVFSGGAS
LEAAEQVCGD EAFAGEQVLD LLTALIEKSL LLADGEGTPR YRMLNTIREY AAHRLAEAGE
TESAHRAHLA YVTELAETAE PHLRRAEQLE WLSTLEAEHD NIGAALRGAI AEGWAQEAMR
LVTAVGWYWF LSGHRAEGTE LSIAAASLHG EVPDEVRAMA YTLVTVFVTS GPGRDQYQAR
KWIHEAHRFT QRSGYRNPLL GFVAPLERML REPTEFLSAF EPLIADDDPW VRAQARLTRG
RLRLTVGGDE TDVDGDIETA LAEFRTLGDR WGISLALTYL ADRLAMRGEF ARACEHYEEA
VAALTEVGGT EDVVGLRARQ AQLYWLLGDE RSSTSAMAEA QRYAGGIAWP DTLADLALSK
AQLARWRGEP DKAHQHLAAA RTTQADAEPN DSFRARTMDL YGYLAEDLEQ ARAHRSEAFR
AAVETTYPPL IAEALIGIAD LALRQGQHEQ AARLLAASDG VRGTPDRSLP DVSRIAADTR
DHLGETVFAE ATRAGQRRDW RELAEITLAP
|
|---|
| |