| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8852 |
|---|
| Symbol | |
|---|
| ID | 8672190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 9773181 |
|---|
| End bp | 9774209 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | L-threonine 3-dehydrogenase |
|---|
| Protein accession | YP_003344228 |
|---|
| Protein GI | 271970032 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCGC TGGTCAAGGA GAAGGCCGAG CCGGGCCTGT GGCTGACGGA GGTGCCGGAG
CCGGCCGTCG GGCCCGGAGA GGTGCTGATC AGGGTGCTGC GGACCGGGAT CTGCGGGACG
GATCTGCACA TCCGCAACTT CGACGCGTGG GCGCAGCAGA CGCTGCGGAC GCCGCTCATC
GTCGGCCACG AGTTCTGCGG CGAGGTCGTC GAGGTGGCGC CCGGCGTGGA GGACATCGCG
GCCGGTGACC TGGTCAGCGG CGAGGGACAC CTGGTCTGCG GGAAGTGCCG CAACTGCATG
GCCGGGCGGC GGCACCTGTG CCGCAACACG GTCGGGCTCG GCGTCAACCG GGACGGCGCC
TTCGCCGAGT ACGTGACGCT TCCGGCCTCC AACGTCTGGG TGCACCGGGT GCCGGTCGAC
CCCGACGTCG CGGCGATCTT CGACCCGTTC GGCAACGCCG TGCACACCGC CCTGGCGTTC
CCGATGGTCG GTGAGGACGT GCTGATCACC GGGGCCGGGC CGATCGGGCT GATGGCCGCC
GCCGTGGCCA CGCACGTGGG CGCCCGCAAC GTGGTCATCA CCGACGTCAG CCCCGAGCGG
CTGGAGCTGG CCCGCAAGCT CGGCGTCAGC CTGGCCCTGA ACGTCGCCGA GCGGTCGGTC
GCCGACAGCC TGCACGAGCT CGGCATGCAC GAGGGCTTCG ACGTGGGCCT GGAGATGTCC
GGGCATCCGC AGGCACTCCG CGACATGATC GCCAACATGA CGCACGGCGG GAAGATCGCC
ATGCTCGGGC TGCCCGCCGA GGAGTTCGCG GTCGACTTCG CGACGATCGT GACCTCGATG
ATCACACTCA AGGGCATCTA CGGCAGGGAG ATGTACGAGA CGTGGTACGC CATGTCCGTT
CTCCTGGAGA AGGGCCTCGA CCTCTCCCCC GTCATCACCG ACCGCTTCTC CTACCGCGAC
TTCGACGCGG CCTTCGACAC CGCCGCCAGC GGCAAGACCG GCAAGATCAT CCTGGATTGG
ACCGCCTGA
|
|---|
| Protein sequence | MKALVKEKAE PGLWLTEVPE PAVGPGEVLI RVLRTGICGT DLHIRNFDAW AQQTLRTPLI
VGHEFCGEVV EVAPGVEDIA AGDLVSGEGH LVCGKCRNCM AGRRHLCRNT VGLGVNRDGA
FAEYVTLPAS NVWVHRVPVD PDVAAIFDPF GNAVHTALAF PMVGEDVLIT GAGPIGLMAA
AVATHVGARN VVITDVSPER LELARKLGVS LALNVAERSV ADSLHELGMH EGFDVGLEMS
GHPQALRDMI ANMTHGGKIA MLGLPAEEFA VDFATIVTSM ITLKGIYGRE MYETWYAMSV
LLEKGLDLSP VITDRFSYRD FDAAFDTAAS GKTGKIILDW TA
|
|---|
| |