Gene Sros_8813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8813 
Symbol 
ID8672151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9722189 
End bp9723442 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content72% 
IMG OID 
Productputative transcriptional regulator, PucR family 
Protein accessionYP_003344190 
Protein GI271969994 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.652147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.896825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATAA AAGAAGATTC CAGGCTCGTT GTCACTGGGT TCGGCGACCG GAAGAGAAGA 
TCTCACGAGC TGTCCGACCA GCGGTTATGG AGATCGGCTC CGGCGGAAGT GGCCAGGCTG
CTGAGACCGG GCCTGTCCGA GGTCGCCGAT CAGGTGATCA AGGAAATCAC GGTACGGATC
CCCGAATACT CCCGGCCTTC CGACGAGATC TACATCAGGG CCATCCGGCT CGCCGTGGAC
GAGGCCCTTC GCCAGTTCGT CGACCGGATC GAGAACCCCA GCACGCCGTG GGAGCCCGAC
GTGTTCCGCA CCATCGGGCG CGGCGAGGCC AACGAGGGCC GCAACCTCGA CCCCCTGCAG
ACCGCGATGC GGCTGGGCGC CCGGGTGGCC TGGCGGCGGC TGACCGAGCA GTCCGAGCGT
CTCGGCCTCA CCCCGCAGCA CCTCTACGAC CTCGGCGAGG CCATCTTCGT CTATCTCGAC
CAGCTCGCCG ACGCGGCCGC CGAGGGCTTC GACGAGGCCA GGGCCCGCGC GGCCGGAGAG
ATCGAGCGCC GCCGCCGCCG GCTGATGGAC CTGCTGCTGA GCCAGCCGGC CGCCTCCCCC
GACGCGATCG CCGACCTGGC CAAGACCGCC GGATGGCGGC TGCCCAAGAC CGTGGCCGGG
GTCGCCCTAG ACGAGCACTC CCGGGGCTAC CGCGCCCCCT CGCTCCCGCC GGACGTGCTG
TCCGGCCTCG ACCGGCCCGG TCCCTGCCTG ATCGTCCCCG ACCCCAACGG CCCCGGCCAG
GCCCAGACCC TGGAGGCCGG GCTGCGCGGC TGGAAGGCGG CCGTCGGGCC CGCCGTACCG
CTGGCCGCCG CCGCGACCTC GCTGCGCTGG GCCCGCGAGG CGCTGGACCT GCACCGGCGC
GGTGTGCTCA CCGAGGAGCG CGGCGTGCTC CGCTGTTCCG ACCACATGGC CACTCTGATC
GTGTTCAAGG ACGAGGAGCT GGTCAGCGCC CTCACCGAGG TACGGCTGGC GCCCCTGGCC
CACCTGCGTC CCAGCCAGCA GGACCGGCTG GCCGAGACGT TGCTGGCGTG GTTGCGGCAC
GGCCGGGGCG CCGGCGAGGT CGCCGCCCGG CTCCACGTGC ACCCGCAGAC CGTGCGCTAC
CGGCTGCGCC AGCTTGAGGA GCTCTACGGC GACCAGCTCA GCGACCCGGA CATCCGGTTC
GAGCTGGAGA TCGTCCTGCG CGCCAGGCAG TCCGTCAGCT CCGGAACAGC CTGA
 
Protein sequence
MTIKEDSRLV VTGFGDRKRR SHELSDQRLW RSAPAEVARL LRPGLSEVAD QVIKEITVRI 
PEYSRPSDEI YIRAIRLAVD EALRQFVDRI ENPSTPWEPD VFRTIGRGEA NEGRNLDPLQ
TAMRLGARVA WRRLTEQSER LGLTPQHLYD LGEAIFVYLD QLADAAAEGF DEARARAAGE
IERRRRRLMD LLLSQPAASP DAIADLAKTA GWRLPKTVAG VALDEHSRGY RAPSLPPDVL
SGLDRPGPCL IVPDPNGPGQ AQTLEAGLRG WKAAVGPAVP LAAAATSLRW AREALDLHRR
GVLTEERGVL RCSDHMATLI VFKDEELVSA LTEVRLAPLA HLRPSQQDRL AETLLAWLRH
GRGAGEVAAR LHVHPQTVRY RLRQLEELYG DQLSDPDIRF ELEIVLRARQ SVSSGTA