| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8733 |
|---|
| Symbol | |
|---|
| ID | 8672071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 9633631 |
|---|
| End bp | 9635229 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Serine phosphatase RsbU regulator of sigma subunit-like protein |
|---|
| Protein accession | YP_003344112 |
|---|
| Protein GI | 271969916 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACGA GCATCGGGGC CGCGCCGCTT CCCGGAACGA TCGACGCGGA GCGCCTCTCC
GCCTCCACGG CGGCGGTGCA GGCCGTGCTC GACGTGATGC CCGGATCGGC GAGCTGGTCC
GTGCCGATCC GTGACGCCAC GGGAACGATC GTCGACCTCC TCATCCAGGC CGTGAGCCCG
GAGGCGGAGG ACGTCCACGG CCGGCGGGGC GAGGAACTGG TCGGCCTGCG CACCCGGCAG
AGTTACCCGT CGGTGGCGGA GACGCCGCTC TGGCAGGCCT ACCTGCGGGT GATGGAGACC
GGCACGTCCG AGCGGTACAG CCCGTACGAG CACGTCGAGG TCGCCGACGG CGTCCCGCAC
CGCTCGACCT ACGCCATGCG GATCGCCCGT CTCGACGACG GCCTGCTCGT CACCTGGGTC
CGCGACGACA TCGGGCAGCG GCTGGAGTCC CGTCTCGCCC GCACCGAGCA CCTGGGCAAC
CTCGGCTGGG GACGCTGGAA CATGGTCACC GGGGAGATCG TCTGGTCGCC GCAGCTCTAC
CGCATCCACG GGCGCGACCC GGCGGAGGGC CCCCTCACCA TCGAGGCGTA CTCCGACCTC
GTCCACAGCG AAGACGCGCC GCTCCTCGCG GGGGCGGCGG ACATGTGGAC GCGCGGTGGC
GGACCCCACG AGCTCGAAGT CCGGATCGGG GTGGGAGATT CCCTCCGCCA CATCCGCATC
TCGGCCGAGG CCACCCTCGA CGCGGCGGGC CGGCCCCTGG AGATCCACGG GATCATGCAG
GACATCACCG GCTGGCGCCG GGCGGCCGAC GAGCTGGCCA GCGTCAGCCG GCGGCTGGAG
GAGGAGAACC AGCTCACCGC CCACCTGCAG AAAATCATCA TGCCGGTCCA GGACGAGCCC
TACACCCTGC CCGGCCTGCG GGTGGCCGCC CGTTACCAGC CCGCCGAGAC GGCGGCCTAC
CTCGGCGGGG ACTGGTACCA GGCGATCGGC CTGGACGACG GTGACGTGCT GCTCGCCGTC
GGGGACGTGG CCGGCAACGG GCTGGCCGCC GCCTCCGCCA TGGCGAAGCT GCGTCACGCG
ATCACCGCCC TGGCCTTCGC CCATCACGAC CCGGCGGAGA TCCTCACCGT GCTGAACCGC
CTGCTGTGCA AGCTCCGGCC CGACGTGCTG GCCACCGCGC TCGTGGCCCG CTACCGCCCG
GCCGACCGCA CCCTGCGGTG GACCCACGCC GGTCACCCCC CGATGCTCCT GGCCCGGGGC
TCGCACGTGG AGCGCCTGCT CCATCCGGGC GTGCTGCTCG GCGTCTTCGA GGACGCCGCC
TACACCTGCG GCACCGTACG GCTCAGGCCC GACGATCTCA TGGTGATGTT CACCGACGGG
CTCATCGAGA AGCGCGGCAG CGACCTCTAC GAAGGTCTGG ATCTCATGAG CGCCGCCCTG
ACCGAGGCCC TCAGGCCGAT CTCCCCCGCC TCCCCGGACC GGCTTCCGGC GGTCATGGAC
GCCATGGTCC CGGCCAACGC GGCCGACGAC ACCTGCATCC TGGTCACCCA GGTCACCCAG
AACGGTGAGA TCATGACGCT CCCCCGCCGG GACGGCTGA
|
|---|
| Protein sequence | METSIGAAPL PGTIDAERLS ASTAAVQAVL DVMPGSASWS VPIRDATGTI VDLLIQAVSP
EAEDVHGRRG EELVGLRTRQ SYPSVAETPL WQAYLRVMET GTSERYSPYE HVEVADGVPH
RSTYAMRIAR LDDGLLVTWV RDDIGQRLES RLARTEHLGN LGWGRWNMVT GEIVWSPQLY
RIHGRDPAEG PLTIEAYSDL VHSEDAPLLA GAADMWTRGG GPHELEVRIG VGDSLRHIRI
SAEATLDAAG RPLEIHGIMQ DITGWRRAAD ELASVSRRLE EENQLTAHLQ KIIMPVQDEP
YTLPGLRVAA RYQPAETAAY LGGDWYQAIG LDDGDVLLAV GDVAGNGLAA ASAMAKLRHA
ITALAFAHHD PAEILTVLNR LLCKLRPDVL ATALVARYRP ADRTLRWTHA GHPPMLLARG
SHVERLLHPG VLLGVFEDAA YTCGTVRLRP DDLMVMFTDG LIEKRGSDLY EGLDLMSAAL
TEALRPISPA SPDRLPAVMD AMVPANAADD TCILVTQVTQ NGEIMTLPRR DG
|
|---|
| |