Gene Sros_8616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8616 
Symbol 
ID8671952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9508546 
End bp9510354 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC transporter ATP-binding protein 
Protein accessionYP_003344001 
Protein GI271969805 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGG TCAATCTTGA GTCGGTCTCC CACTCCTACG GTCCCAAGCC GCTGCTCAGC 
GACGTCTCCC TCGGCATCGA GGCGGGCGAC CGCGTCGGGG TGGTCGGCCG CAACGGCGGC
GGCAAGACCA CGCTCATCTC GGTGATAGCC GGCGATCTCA AGCCCAACGG CGGACGGGTC
ACCCACAACC GCGGCCTCCA CGTCGCGAGC CTGTCCCAGG GCGACGATCT CGACCCGGCG
CTGTCGGTGC AGGAGATCGT CCTCGGCGGC AGGCCCGAGC ACGAGTGGGC GGGTGACGCG
GGCATCCGCG AGATCCTCTC CAGCCTGCTC GGCGACATCG ATCTCACCGC GCTCGCCGCG
AGCCTGTCGG GTGGCGAGCG GCGCCGTACG GCACTCGCCA AGCTGCTCAT CGACGAGCAC
GACCTGATCA TCCTGGACGA GCCCACCAAC CACCTCGACA TCGAGGCCAT CGACTGGCTG
GCCAGGCACC TGTCCGGCCG GAAGACCGCC CTGCTGGTCG TCACCCACGA CCGGTGGTTC
CTGGACGCGG TCTCCACCCG GACCTGGGAG GTCGTGGACG GCTCGGTCGA GCGCTACGAG
GGCGGCTACG CGGCCTACGT GCTGGCCAAG GCCGAGCGCG CCCGGATCGC CGCCTCCGCC
GAGGCGCGCC GGCAGAACCT CATGCGCAAG GAGATCGCCT GGCTCCGCCG GGGCCCGCCC
GCGCGCACCT CCAAGCCCAA GTTCCGCATC GACGCCGCCC AGGCGCTGAT CGCCGACGAG
CCCCCGGCCC GGGAGACCGT CGAGCTGGTC AAGTTCGCCG CGGCCAGGCT GGGCCGTACG
GTCTACGACC TTGAGGACGT CACCCTGCAC GCCGGCGGTC CCGGTCAGGG CCCGCTGGTC
CTGGACCACT CCACCTGGCA GTTCGGCCCG GGTGACCGGA TCGGCCTGAT CGGCGTGAAC
GGTTCCGGCA AGTCCTCGGT GCTGCGGCTG CTCGCCGACA CGGTCCAGCC CGACTCCGGC
AGGGTCGTGC GGGGCCGGAC GGTCCGCCTG GCGCACCTGT CACAGGAGCT GGGCGAGCTC
GACCCCGCGC GCCGGGTGCT GGAGACCGTC GAGGAGGTCC GCAAGTTCAT CCAGGTCGGC
AAGAAGGAGT GGACCGCCTC ACAGCTCCTG GAGCGTCTCG GGTTCAAGGG CGACGCCCAG
TGGAAGGTCG TCGGCGACCT GTCCGGCGGC GAGCGGCGGC GGCTCCAGCT GCTGCGCCTG
CTGATGGACG ACCCGAACGT GCTGCTGCTC GACGAGCCGA CCAACGATCT CGACATCGAG
ACGCTGAACG AGCTGGAGGA CCTGCTCGAC GGCTGGCCGG GCACGCTGGT CCTGGTCAGC
CACGACCGTT ACTTCCTGGA GCGGGTCTCC GACCGGATCG TCGCCCTGCT CGGCGACGGC
AAGCTGTCCA TGCTCCCCGG CGGCGTCGAC GAATATCTGG CGCGACGTGC CTCGGGTGCG
GCGCTGTCGG CACGGGCGGC CTCCGGCGCG GCGGCTCCCG CGGCCCCGGC CCCGGCGGGA
GCGGCGCAGG ACTCCGCGTC CGGCCTGTCG GCCAAGGAGG AGCGCGAGCT CCGCAAGGAG
CTCTCCCGCC TGGAGCGCCA GCTCGACAGG CTGAGCGGCC GTGAGGCCAA GCTGCACGCG
TCCATGGCCG ACGCCGCCGC CGACTACGGC CGTCTGGCCT CGCTCGACGC CGAGCTCAAG
GACATCGTCG CCGAGAAGGA CGGCATCGAG GCGGAGTGGC TGGAGGTGGC CGACCGTCTC
GGCGAATGA
 
Protein sequence
MNLVNLESVS HSYGPKPLLS DVSLGIEAGD RVGVVGRNGG GKTTLISVIA GDLKPNGGRV 
THNRGLHVAS LSQGDDLDPA LSVQEIVLGG RPEHEWAGDA GIREILSSLL GDIDLTALAA
SLSGGERRRT ALAKLLIDEH DLIILDEPTN HLDIEAIDWL ARHLSGRKTA LLVVTHDRWF
LDAVSTRTWE VVDGSVERYE GGYAAYVLAK AERARIAASA EARRQNLMRK EIAWLRRGPP
ARTSKPKFRI DAAQALIADE PPARETVELV KFAAARLGRT VYDLEDVTLH AGGPGQGPLV
LDHSTWQFGP GDRIGLIGVN GSGKSSVLRL LADTVQPDSG RVVRGRTVRL AHLSQELGEL
DPARRVLETV EEVRKFIQVG KKEWTASQLL ERLGFKGDAQ WKVVGDLSGG ERRRLQLLRL
LMDDPNVLLL DEPTNDLDIE TLNELEDLLD GWPGTLVLVS HDRYFLERVS DRIVALLGDG
KLSMLPGGVD EYLARRASGA ALSARAASGA AAPAAPAPAG AAQDSASGLS AKEERELRKE
LSRLERQLDR LSGREAKLHA SMADAAADYG RLASLDAELK DIVAEKDGIE AEWLEVADRL
GE