Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8577 |
Symbol | |
ID | 8671912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 9462833 |
End bp | 9464260 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003343962 |
Protein GI | 271969766 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.798401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGGAC TAGCTCGTAA GCTAGCCGCC GTAGGAGCCA GCACGGCCAT GCTGGCGACG ATGGCGGCAG GACTTCTGGC CACGCCCGCA GCGGCGGCCA GCGGTTCCAC CACCCAGGCG GGGAAGACGG CTTCCTCCTC CTCCGCCACG CCGAGGCCCG CGGTCTCGGT GAGCAAGACG AAGGCCTCCC CCTCCCACTC CGACGAGTGC CCCACCCGGG TGACGTTCTC CTCGCGGATC AAGGTGAAGG CCTACGGGGG CAAGACCACC GTGGCCTACC GCTGGCTGCG CGGGAACGGC TCCAAGAGCG CGGTCAAGAC CGTCGTGCTC AAGGGCAAGG GCGTCAAGTA CGTCACGGCG AAGGAGTCCT CGACCTTCAA GGGCGGCGAC CTCAAGGGCT GGCAGGCGCT GCAGGTTCTG GCGCCGCGCA AGGTCACCTC CGCCAAGGGC TACTTCAAGG TCTCCTGCGG TGACGAGGGT GACGACGACA AGTACGTCGT CAACACCCAC ACCGTCGGAG CCCAGGCGTG GGTCGACGAG CGCAACTGTG AGGCGACCCT CATCGGCCGC ATCACCGCCT CCGGCACGCG CTGGGTGCGC TACCAGTGGG TCGTCAACGG CCGCGTCGTC GACCGGGACG CCGTGCGCGT CTACGGCTCG CGCAAGGTCT ACCACGTGAT CAGGCCGCAC GAGAGCCTGC GTGGCTGGGC GGTCCTGCAG ATCCTGAGCC CGGGGGACGC CTCCTCCAAC CGCGCCTACT TCAAGATCTG GTGCCGGGAC TCGTCGCCGA AGGTCTCGGC CTCCGTCAAC GCCCCCTCGA ACTACGAGGG CGACTGCCCG GTCACCCGCA CCTTCACCGG CACGATCAGT GCCTCGCACG GTCGTGGCGA GGTCAAGTAC CGCTGGATCC GTGACGGTGT CGCGGGCGGC TGGCAGAGCG TCTACTTCGA CGGCCGTGGC TACGGTCACC AGAGCCGCAG CGTGAGCGAC TCCTGGACCG CCTCGGCGTC CGGGACCAGC AGGCGCTCGA TCGAGATCTA CGGCGGCCCG ACCAGCGGCA CCGTCGAGGG CAAGGTCACC TGCAAGGCCG CCCCGCCGGC GTCGAAGGCC TGGATCCAGG CCGGCACGTC GGTCAAGCAG GTCGAGGCCG GCTGCCCGGC GGGCTCGGTC ACCGGCACCG GCAGCATCTA CGCCACCGGT CCGATCAAGG TCACCGTCAC CTGGAGCCTC AACGGCTCCG TCGTGAAGTC CGAGGACCTG GAGTTCACCT CGGAGGGCAC CAAGTCCGTC TCCTTCACCA GCGCGTCGGA CGGCCTCAAG GCCGGCAACG CCAGGCTGGG GATCGTCGGC GGCGGCTCGA CGACCCTGGA CTACGAGGCG GTCTGCGTCA AGGCCACTGA CAAGTCCGCT GAGGCCAAGG ACGCCTGA
|
Protein sequence | MSGLARKLAA VGASTAMLAT MAAGLLATPA AAASGSTTQA GKTASSSSAT PRPAVSVSKT KASPSHSDEC PTRVTFSSRI KVKAYGGKTT VAYRWLRGNG SKSAVKTVVL KGKGVKYVTA KESSTFKGGD LKGWQALQVL APRKVTSAKG YFKVSCGDEG DDDKYVVNTH TVGAQAWVDE RNCEATLIGR ITASGTRWVR YQWVVNGRVV DRDAVRVYGS RKVYHVIRPH ESLRGWAVLQ ILSPGDASSN RAYFKIWCRD SSPKVSASVN APSNYEGDCP VTRTFTGTIS ASHGRGEVKY RWIRDGVAGG WQSVYFDGRG YGHQSRSVSD SWTASASGTS RRSIEIYGGP TSGTVEGKVT CKAAPPASKA WIQAGTSVKQ VEAGCPAGSV TGTGSIYATG PIKVTVTWSL NGSVVKSEDL EFTSEGTKSV SFTSASDGLK AGNARLGIVG GGSTTLDYEA VCVKATDKSA EAKDA
|
| |