Gene Sros_8560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8560 
Symbol 
ID8671894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9444824 
End bp9446770 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003343945 
Protein GI271969749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATC GCTATGGCGA ATACCGGGAC GGGCCCGACC CGCTCGCCCC GCCGTACGAC 
GTCCGTTCGG CGCTCGACCA GATGGGCGAC GCCGTCCTGT CCGGCTCCAA CCCCGGCCAC
GCCCTGCGTG ACCTGCTCAA GCAGGGCCTG CCGGGAGCGC GGGACCGGCG CGGGCTGGAC
GATCTGCTCC GCGAGGTACG GCGGCGCCGG CGCGAGCTGC GTGAGCGCGG CCGGCTCGAC
GGCACGCTGG AGCGGGCCAG GGCCCTGCTG GACAAGGCGA TCGGCCAGGA GCGGAGCGAG
CTGTTCCCCG ACCCGTCGGA CGACGCCCGG CTCCGCGAGT CGGAGCTCGA CGGTCTCCCC
GAGGACACGG CGAGCGCGAT CCAGGATCTG AGCACCTACC AGTGGCGCTC GGCCGCCGCC
CGGCGGACCT TCGAGGAGCT GCGCGACCTG CTGCGCAGGG AGGTGCTCGA CAGCCAGTTC
CGCGGCATGC GGGAGGCGCT GGCCAACCCC GACCCCGCCG CGATGGAGCG GGTCCGGGAG
ATGATGTCCG AGCTCAACGA CATGCTCGAC CGGGACGCGC GGGGCGAGCA CACGCAGGAT
GACTTCGAGA ATTTCATGTC GAAATATGGA GACATGTTCC CGGAGTCGCC GCGGAACCTG
GAGGAGCTGG TCGACACCCT CGCGCGCCGG GCCGCCGCGA CCCAGCGCCT GCTGGCCTCG
CTCACCCCCC GCCAGCGCGA GGAGCTCAAC GCGCTGATCA ACCAGACGCT GGAGCAGGCC
GGGATGGGCG AGCAGATGCG CCGCCTGGGC GAGTCGCTCT ACGCCCGCCG CCCCGACCTC
GCCTGGAACA CCCCGGAACG GCTGACCGGC GACGACCCCA TGGGGATGGG CGACGCGGTG
ACGGCCCTCG ACGAGCTCGC CGACCTGACC CAGCTTGAGG CCGCGCTCCG CCAGGACTAC
CCCGGAGCGC GGCTGGACGA CATCGACGAG GGGGCGATCC GCCGCGCGCT GGGCCGCGCG
GCCGTCGACG ACCTGGAGGC GCTCCGGCAG ATCGAGCGGG AGCTGGAGCA GCAGGGCTAC
CTCCGCCGCC AGCGGGGCAA GCTGGAGCTC ACCCCCAAGG CCGTCCGCCG CCTCGGCGAG
ACCGCCCTGC GCCGGGTCTT CGCCTCGCTT GAGTCGGGCC GCCGCGGCGA CCACGACCAG
GTCGACGCCG GCGCCGCCGG GGAGCTCACC GGCTCCTCCC GGCCCTGGCG GTTCGGCGAC
GAGCAGCCCA TCGACGTGGT GCGCACGGTG GTCAACGGCG TGCGGCGCGG CGGGGGCGGC
GGTGCGGTCA CCCTGTCGGT CGACGACTTC GAGGTGGCGG AGACCGAGCG GCGCACGGCC
GCGGCGGTGT GCCTGCTGGT GGACCTGTCC TACTCGATGG CCCTGCGCGG CACCTGGGCC
GCGGCCAAGC AGACCGCGAT GGCGCTGCAG GCACTCGTCG CCTCGAAGTT CCCCCAGGAC
TCGGTGCAGA TCATCGGCTT CTCCAACTAC GCCCGCGTCC TGCAGCCCGA CGAGCTGGCC
GGGCTGGAGT GGGACATGGT CCAGGGCACC AACCTGCACC ACGCCCTGCT GATCGCGGGC
CGCCATCTGG ACCGCCATCC CGACTTCGAG CCGGTCGTGC TCGTGGTCAC CGACGGTGAG
CCGACCGCCC ACCTGCGGCG CAACGGCTCA GCGGCCTTCG AGTGGCCACC CACGCAGGAG
ACGCTGGAGC TGACACTCGC CGAGGTCGAC AAGATGACCC GGCGCCGGGC GACGCTCAAC
GTGTTCATGC TCGCCGAGGA CGAGCGGCTG AAGGAGTTCG TGAACGAGGT CGCCCGGCGC
AACGGCGGCC GGGTGTTCTC CTCCGGCGCC GACCGGCTGG GCGAATACGT CGTCAGCGAC
TTCCTGCGGA CCCGCCGGGC GCGCTAA
 
Protein sequence
MSYRYGEYRD GPDPLAPPYD VRSALDQMGD AVLSGSNPGH ALRDLLKQGL PGARDRRGLD 
DLLREVRRRR RELRERGRLD GTLERARALL DKAIGQERSE LFPDPSDDAR LRESELDGLP
EDTASAIQDL STYQWRSAAA RRTFEELRDL LRREVLDSQF RGMREALANP DPAAMERVRE
MMSELNDMLD RDARGEHTQD DFENFMSKYG DMFPESPRNL EELVDTLARR AAATQRLLAS
LTPRQREELN ALINQTLEQA GMGEQMRRLG ESLYARRPDL AWNTPERLTG DDPMGMGDAV
TALDELADLT QLEAALRQDY PGARLDDIDE GAIRRALGRA AVDDLEALRQ IERELEQQGY
LRRQRGKLEL TPKAVRRLGE TALRRVFASL ESGRRGDHDQ VDAGAAGELT GSSRPWRFGD
EQPIDVVRTV VNGVRRGGGG GAVTLSVDDF EVAETERRTA AAVCLLVDLS YSMALRGTWA
AAKQTAMALQ ALVASKFPQD SVQIIGFSNY ARVLQPDELA GLEWDMVQGT NLHHALLIAG
RHLDRHPDFE PVVLVVTDGE PTAHLRRNGS AAFEWPPTQE TLELTLAEVD KMTRRRATLN
VFMLAEDERL KEFVNEVARR NGGRVFSSGA DRLGEYVVSD FLRTRRAR