Gene Sros_8553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8553 
Symbol 
ID8671887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9438058 
End bp9438894 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003343938 
Protein GI271969742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCCTG ACGTGCCCCC CGACGTCATC CGGTTGGACG ACGTCAGCCG GGCGTTCCCC 
ACGGAGCCGC CCGTGCTCGC GCTCTCCAGG ATCTGCCTGC GCGTCGGGCA GGGGGACTAC
GTGGCCATCG TGGGCCCCTC GGGGTCCGGG AAGTCCACCC TGCTCAACAC GCTGGGCCTG
CTGGACCGGC CCACCTCGGG CTCCTACCTG CTGGACGGGA TCGAGACGAC CACCCTGAGG
GACGGCGCCA GGACCCGGCT GCGGGGGCGC AAGATCGGGT TCGTCTACCA GTCCTTCCAC
CTGCTCGCCC ACCGGACCGT GGTGGAGAAC GTCATGCTCG CCGAGGTCTA CGGCCGGAGC
GGCCGGGCCT GGCGGGAGAA GGCGGGGCCC GGAAGGCCGA CACTCGGAAG GCCGACACTC
GGGAGGGCGG GTCGCGGGAG GCCCGGGAAC GAGCCGGCGG GCCGGGGAAA GCCGGAGAAC
GGGCCGGCGG GCGCGGCCGC CAACGAGTAC GGCCGGCGGG GACGGCGAGC CCGCGCCGAG
GAGGCGCTGG AGAAGGTGGG CATGACCCAC CGCCTCGACT TCCTGCCCGA CCGCCTGTCC
GGCGGCGAGC GCCAGCGGGT GGCCATCGCC CGCGCGCTGA TGGGCGGCCC GTCGCTGCTG
CTGTGCGACG AGCCCACCGG CAACCTCGAC AGCAGGAACA CCGGAGCGGT CCTCGACCTC
TTCGACGGCC TCCGCGACCA GGGGCTCACC CTCCTGGTCA TCACCCACGA GGACGCGGTG
AGCTCCCGCG CCGGCCGCCG GGTCCGCATC AGCGACGGCA TCCTCACGGA GGAATGA
 
Protein sequence
MIPDVPPDVI RLDDVSRAFP TEPPVLALSR ICLRVGQGDY VAIVGPSGSG KSTLLNTLGL 
LDRPTSGSYL LDGIETTTLR DGARTRLRGR KIGFVYQSFH LLAHRTVVEN VMLAEVYGRS
GRAWREKAGP GRPTLGRPTL GRAGRGRPGN EPAGRGKPEN GPAGAAANEY GRRGRRARAE
EALEKVGMTH RLDFLPDRLS GGERQRVAIA RALMGGPSLL LCDEPTGNLD SRNTGAVLDL
FDGLRDQGLT LLVITHEDAV SSRAGRRVRI SDGILTEE