| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8514 |
|---|
| Symbol | |
|---|
| ID | 8671848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 9391924 |
|---|
| End bp | 9393837 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, PucR family |
|---|
| Protein accession | YP_003343900 |
|---|
| Protein GI | 271969704 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.484421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATGG AAGACATGAG CGCACGGGTC TTTCTCGAAC TGCTGGCCAG GGAGGCGTCG
GCGGTCGAGT TCGAGGGGCC CATCCTGGCC GCTAGAGCCG GTGGGGCCGA CGCGGCGGCG
CTGGCCGAGC TGGAGGAGGC CAAGCTCGCC GCGCTGAAGG TGCGGGCGCT GCTGCGGCGC
AGGGCCAAGC GCGAGGCCGA GCTGTCGGCG CTGTTCGACA CCGCGGGCGA CCTGGCCGGC
CTGCGGGACC TCGACGCCGT GCTCGAAGCC ATCGTGCACC GTGCCAGGCA GCTCCTGGGC
ACCGACGCCG CCTACATGAC GCTGCACGAC CCCGAGCGGG GCGACACCTG GATGCGGGTG
ACCGACGGCT CGGTCTCGGC CAAGTTCCGC GCGCTCCGGC TGGCCATGGG CGCCGGGCTC
GGCGGGCTGG TGGCCCAGAC CGCCACGCCG TACGCGACGG CCGACTACTT CGCCGACGAG
CGCTTCCGCC ACAAGTTCCA CATCGACGAC GCGGTGACGG AGGAGGGCCT GGTCGCCATC
CTGGGCGTGC CGCTCAAACT CGGCGCGCGG GTCATCGGGG TGCTGTTCGC GGCCAACCGG
AGCGTGCGGC CGTTCACCCA GGACGAGGTG GTGCTGCTCG GCTCGCTGGC CGCGCACGCG
GCGGTCGCGA TCGACAACGC CCGGCTGCTG CAGGAGACCA GAAACGCCCT GGAGGAGCTC
AGCGAGGCCA ACCGGCAGGT GAACGCGCAC AGCGAGGCCG TGGAGCGGGC CGCGCTCGCG
CACGACCGGA TGACCGGGCT GGTGCTGCGC GGCGGCGGGG TCGAGGACGT CGCCGCCGTG
GTCACCGAGG TGCTCGGCGG CTCGCTGGTC GTGCTGGACG ACGTGGGGCG GCCGATCACC
GGCGACGCGG GAGGGCTGGC GCGGGAGGGC GGCCCCGAGG ACGCGGGGCA GGGGCCCGAG
GCGACGGCGG CGGTGATCGC GGAGGCCGCG CGGTCGTCCC GGGCGCTGGG CCGTACCGTC
AAGAAAGGCA ACCTGCTGGT CGCCTCGGTG GACGTGGGGG CCGAGCCGCT GTGCACGCTC
GTGCTGCGGG CCGACGGCCA GGTGGCGGAC ACCGACCAGC GCATCCTCGA ACGGGCCGCG
CTGGTCACCG CGCTGCTCCT GCTGTTCCGG CGGACGGTGG CCGAGGCGGA GGGCCGGGTC
AGGGGTGAGC TGCTCGACGA CCTGATCTCC CGCCCCGCCC TCGACGGCCT GGTCCAGCGG
GCCCGGCGGG TCGGGGTGGA GCTGGAGGCC GACCACGTGG TGGTCGTGGT CCGCCACGGC
GGCCGGCGCG AGCGCGCCGC CTTCTGGGCC TCCTCCCAGG CCACGCTGAG CCACGGCCTG
GCGGCCCTGC GCGGGGACGA GGTGGTGCTG CTCCTGCCCG GCGACAGACC TGGCCACCTG
GCCAAACGGG TGGCGGCCGA GCTCAGCGCC TCCCTCGGCC ACCCCGCCAC CGCGGGCGCC
TCCGGCCCGG TGCGCGGTCC CGCCGAGGTC GCCGCCGCCC ACCGCGAGGC ACAGCGCTGC
GCCGACGCCC TGCTGGCCCT GGGCCGGGCC GGGGAGGGCG CGAGCGCCAC CGAGCTGGGC
TTCGTCGGGC TGCTCGTCGG CGACGGCCGC GACATCGAGG CGTTCCTGGG TTCGGCGCTC
GGACCGGTGA TCGACTACGA CGCCCGCAGG GGCACCGCCC TGGTGCGCAC CCTCACCGCC
TACTTCGGCG CGGGCGGCTC GCTCTCGCGT ACGGCCGAGG CCCTCCACAT CCACGTCAAC
ACCGTCACCC AGCGGCTGGA CCGGATCGCC CAGCTCCTCG GCGCCGACTG GCAGGCCCCT
GAGCGCGCCC TGGAGATCCA GCTCGCCCTC CGCCTCCACC GCCTCAGCCG GTAG
|
|---|
| Protein sequence | MRMEDMSARV FLELLAREAS AVEFEGPILA ARAGGADAAA LAELEEAKLA ALKVRALLRR
RAKREAELSA LFDTAGDLAG LRDLDAVLEA IVHRARQLLG TDAAYMTLHD PERGDTWMRV
TDGSVSAKFR ALRLAMGAGL GGLVAQTATP YATADYFADE RFRHKFHIDD AVTEEGLVAI
LGVPLKLGAR VIGVLFAANR SVRPFTQDEV VLLGSLAAHA AVAIDNARLL QETRNALEEL
SEANRQVNAH SEAVERAALA HDRMTGLVLR GGGVEDVAAV VTEVLGGSLV VLDDVGRPIT
GDAGGLAREG GPEDAGQGPE ATAAVIAEAA RSSRALGRTV KKGNLLVASV DVGAEPLCTL
VLRADGQVAD TDQRILERAA LVTALLLLFR RTVAEAEGRV RGELLDDLIS RPALDGLVQR
ARRVGVELEA DHVVVVVRHG GRRERAAFWA SSQATLSHGL AALRGDEVVL LLPGDRPGHL
AKRVAAELSA SLGHPATAGA SGPVRGPAEV AAAHREAQRC ADALLALGRA GEGASATELG
FVGLLVGDGR DIEAFLGSAL GPVIDYDARR GTALVRTLTA YFGAGGSLSR TAEALHIHVN
TVTQRLDRIA QLLGADWQAP ERALEIQLAL RLHRLSR
|
|---|
| |