Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8500 |
Symbol | |
ID | 8671834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 9378192 |
End bp | 9379844 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | fumarate hydratase, class I |
Protein accession | YP_003343886 |
Protein GI | 271969690 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGAGT TCGACTACAC CGACCTGCTC CCCATGGGAC CGGATGAGAC GCGATACCGT CTGATCAGCG CCGAGGGGGT GCGCGTGGTC GAGGCTGCGG GCCGCAGGTT CCTGGAGGTC GAGCCCGAGG CGCTCCGGCT GCTGACCGAG ACGGCGATCC ACGACATCTC CCACTATCTC CGGTCGTCCC ACCTCGCCCA GCTCCGCAAG ATCATCGAGG ACCCCGAGTC CAGCGGGAAC GACCGCTTCG TCGCCCTCGA CCTGCTGAAG AACGCCTCGA TCTCGGCCGG CGGCGTGCTC CCCATGTGCC AGGACACCGG CACCGCGATC GTGATGGGCA AGCGCGGCCG CCACGTGCTC ACCGACGGCG CCGACGCCGA GCACATCTCG CGCGGCGTCT ACGACGCCTA CACCAAGCTG AACCTGCGCT ACTCCCAGAT GGCCCCGATC ACCATGTGGG AGGAGAAGAA CACCGGCTCC AACCTCCCGG CGCAGATCGA GCTCTACGCC GAGGACCCCC ACGGCCACCC GGACGAGTAC AAGCTGCTGT TCATGGCCAA GGGCGGCGGC AGCGCCAACA AGTCGTTCCT GTACCAGGAG ACCAAGGCGG TCCTCAACGA GAAGCGGATG CTCCAGTTCC TGGAGGAGAA GATCCGCTCC CTCGGCACCG CCGCGTGCCC GCCGTACCAC CTGGCGATCG TCGTCGGCGG CACCTCCGCC GAGTTCGCCC TGAAGACGGC CAAGTACGCC AGCGCCCGCT ACCTGGACGC CATCCCCACC GAGGGCTCGG CCAGCGGTCA CGGCTTCCGC GACACCGAGC TGGAGGCCAA GGTCTTCGAG CTCACCCAGA AGCTCGGCAT CGGCGCCCAG TTCGGCGGCA AGTATTTCTG CCACGACGTC CGCGTCATCC GTCTCCCCCG CCACGGCGCC TCCTGCCCGG TCGCCGTCGC GGTCTCCTGC AGCGCCGACC GCCAGGCCCT GGCCAAGATC ACCCCCGAGG GGATCTTCCT GGAGCAGCTG GAGACCGACC CGGCGAGGTT CCTGCCGGAG ACCACCGACG AGCACCTGTC GGACGACGTC GTGCGGATCG ACCTCAACCG GCCGATGCCG GAGATCCTCG CCGAGCTGAC CAAGTATCCG GTCAAGACCC GCCTGTCCCT GAGCGGTCCC CTGGTCGTCG CCCGCGACAT CGCCCACGCC AAGATCGGCG AGCTGCTCGA CGCCGGCGGC GAGATGCCGC AGTACCTCAA GGACCACGCG GTCTACTACG CCGGTCCCGC CAAGACCCCC GAGGGCTACG CCTCCGGCTC CTTCGGCCCC ACCACCGCCG GCCGCATGGA CTCCTACGTC GAGCGCTTCC AGGCCGCCGG CGGCTCCAAG GTCATGCTCG CCAAGGGCAA CCGCTCCAAG CAGGTCACCG ACGCCTGCGC GGCCCACGGC GGCTTCTACC TCGGCTCCAT CGGCGGCCCC GCCGCCCGCC TCGCCCAGGA CTGCATCAAG AAGGTCGAGG TCCTGGAGTA CCCCGAACTC GGGATGGAGG CCGTCTGGAG GATCGAGGTC GAGGACTTCC CCGCCTTCAT CGTCGTCGAC GACAAGGGCG AAGACTTCTT CACCGATTCG ACCGGTCCCG TCCTGTCCAT CGGCCGCCGG TAG
|
Protein sequence | MPEFDYTDLL PMGPDETRYR LISAEGVRVV EAAGRRFLEV EPEALRLLTE TAIHDISHYL RSSHLAQLRK IIEDPESSGN DRFVALDLLK NASISAGGVL PMCQDTGTAI VMGKRGRHVL TDGADAEHIS RGVYDAYTKL NLRYSQMAPI TMWEEKNTGS NLPAQIELYA EDPHGHPDEY KLLFMAKGGG SANKSFLYQE TKAVLNEKRM LQFLEEKIRS LGTAACPPYH LAIVVGGTSA EFALKTAKYA SARYLDAIPT EGSASGHGFR DTELEAKVFE LTQKLGIGAQ FGGKYFCHDV RVIRLPRHGA SCPVAVAVSC SADRQALAKI TPEGIFLEQL ETDPARFLPE TTDEHLSDDV VRIDLNRPMP EILAELTKYP VKTRLSLSGP LVVARDIAHA KIGELLDAGG EMPQYLKDHA VYYAGPAKTP EGYASGSFGP TTAGRMDSYV ERFQAAGGSK VMLAKGNRSK QVTDACAAHG GFYLGSIGGP AARLAQDCIK KVEVLEYPEL GMEAVWRIEV EDFPAFIVVD DKGEDFFTDS TGPVLSIGRR
|
| |