Gene Sros_8497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8497 
Symbol 
ID8671831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9375316 
End bp9376761 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content77% 
IMG OID 
Productputative transcriptional regulator, GntR family 
Protein accessionYP_003343883 
Protein GI271969687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.479688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.840388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGATC TGCATCTGGT CGTCGACCGG GCGGCGGGTG GGATCGCCGG GCAGATCGCC 
CGCGAGCTCC GGGAGGCCGT ACGGCAGGGC AGGCTCCCGG CCGGCGGGCG GCTGCCCGCC
AGCAGGGAGC TGGCCAGGGA TCTGGGGCTG TCGCGCGGCG TGGTCGTGGA GGCCTACGAG
CAGCTCGTCG CGGAGGGACT GCTGATCTCC CGGGTCGGCG CGGGCACCAG CGTGGCCCCG
GCGGCGAGCC GGCCCCCGGG CGCGGCCCTC CGCGACCCCC TGGTGCCCGC CTTCGAGCCG
TACTACGGCC ACCGCTCCAC ATCCCCCGAC CTGAGCGCCT TCCCGCGTGA GCGGTGGCTC
GCCTCGATCA GGCGGGCGCT CGCCACCCTG CCCGCCGACG CGCTGGACTA CGGAGACCCC
GGCGGCGTCC CGGCCCTGCG CGAGGAGCTG GCCGACTACC TGCGGAGGGT CCGCGCGGCG
GACGCCGGCC CCGACGACAT CGTGATCGTG GGCGGGGTGG CCCAGGGGCT GAGCCTCACG
GTCCAGGCGC TCGCCGGGCA GCTCCCCGAG GGCCGGGCCG GCCACGACCT GAACTGGTTC
GTCGACCGTC TCGCCCACCC CGTGCCGCCT CCCGGCCGGA TCCGGCTGGC CGTGGAGGAC
CCGGCCGGCG TGCGCCAGCT CCCGCTGCTC CGCGCGGCGG GGGCCGACCT GGTCGCGGTC
CCGGTGGACA GGGAGGGGAT CGACGTCGGG GCCCTGGCCG CGACCGGGGC GCGGGCGGTG
CTGCTGACCC CCGCCCACCA GTACCCCACC GGAGTCGTGC TCTCCCCCCG CCGCCGCGCC
GAGCTGATCG AGTGGGCCGC CGGGACCGGC GCGACGATCC TTGAGGACGA CTACGACGCG
GAGTTCCGGT TCGACCGCGA TCCGGTGGGC TGCCTGCAGG GGCTCGCCCC CGGCCGGGTG
GTCCTGGCGG GCAGCGTGAG CAAGTCCCTG GCCCCGGGGC TCCGGCTGGG CTGGGTGGTG
GCCCCGCCGG GGATCGCCGA GTCGGTACGG CGGGCCCGCG GCGAGCTGGA TCTGGGCTCG
CCGGTCCTGG AGCAGTACGC GCTGGCGGAC CTCATCGGCA ACGGCGGCTA CGACCGGCAT
CTGAGGAGGA TGCGCCGGGA GTACCGTGCC CGGCGTGACG CGTTCGTGCG GGCGCTGGCC
GAGCATCTCC CCGAGATCAG GGTGCACGGC GTCTCCGCCG GGCTGCACCT GTTCGCCGAA
CTCCCCGGCG GCTGCGACGA GTCGCAGGCC ACCGAGGCGG CCCAGGCATG CGGCCTCGCC
GCCGAGCCGG TGGGTGCGAT GCGCGGCACC CCGGGGCCGC CCGCCCTGGT CATGGGTTTC
GCCCGCCTCC CCGTCCACCG CGCCGACCAG GCCATCCGCG CCTTCGCGGC CGGGCTGCGG
CGCTGA
 
Protein sequence
MADLHLVVDR AAGGIAGQIA RELREAVRQG RLPAGGRLPA SRELARDLGL SRGVVVEAYE 
QLVAEGLLIS RVGAGTSVAP AASRPPGAAL RDPLVPAFEP YYGHRSTSPD LSAFPRERWL
ASIRRALATL PADALDYGDP GGVPALREEL ADYLRRVRAA DAGPDDIVIV GGVAQGLSLT
VQALAGQLPE GRAGHDLNWF VDRLAHPVPP PGRIRLAVED PAGVRQLPLL RAAGADLVAV
PVDREGIDVG ALAATGARAV LLTPAHQYPT GVVLSPRRRA ELIEWAAGTG ATILEDDYDA
EFRFDRDPVG CLQGLAPGRV VLAGSVSKSL APGLRLGWVV APPGIAESVR RARGELDLGS
PVLEQYALAD LIGNGGYDRH LRRMRREYRA RRDAFVRALA EHLPEIRVHG VSAGLHLFAE
LPGGCDESQA TEAAQACGLA AEPVGAMRGT PGPPALVMGF ARLPVHRADQ AIRAFAAGLR
R