Gene Sros_8489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8489 
Symbol 
ID8671823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9368362 
End bp9368973 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content74% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003343876 
Protein GI271969680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.280909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.379927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGCGG GAGCTGACCG GCGCAGAGGT TATCCGGCCG GGGAGGCGCG GAGGGAGCGC 
ATCCTGGCCG TCGCGCTGCA GGAGTTCGCC GAGAACGGCT ACCGGGGAGC CTCCCTCGCC
CGCATCGCCG AGCGGGCCGA GCTCTCCCAG GCCGGGCTGC TCCACCACTT CCGGAGCAAG
GAGCACCTGC TGACCGCGGT CCTCGACCAC CGCGACGAGC TCGACCTGCG CCGCTACGAC
CTCGGCGGCG TGCGCACCGG CGCCGACGCG CTCGGCGTCC TGGTCGACGT GGTCGAGCAC
AACTCGCGCG TCCCCGGGCT CGTCCAGCTC TTCACCGTGA TCACCGGTGA GGCGGTCACC
GCCGACCATC CCGGCCACGA CTGGGCCCGC CGCCGCTACC GGCGGCTCCG CGGCGAGGTG
ACCCGGGCGC TGGGCAGGGC GGTGGAATCC GGCGAGTTCC GCGCGGGCAC CGACCCCGAG
GCCCACGCCG ACCGGCTGAT CGCCATGATG GACGGCCTGC AGAACCAGTG GCTCCTGGAC
CCCGACCGGG TCGACATGGC CGCCGTCTTC CGCGGCTATG TCGACGACCT CGTCGCGCTG
CTACGGCCCT GA
 
Protein sequence
MRAGADRRRG YPAGEARRER ILAVALQEFA ENGYRGASLA RIAERAELSQ AGLLHHFRSK 
EHLLTAVLDH RDELDLRRYD LGGVRTGADA LGVLVDVVEH NSRVPGLVQL FTVITGEAVT
ADHPGHDWAR RRYRRLRGEV TRALGRAVES GEFRAGTDPE AHADRLIAMM DGLQNQWLLD
PDRVDMAAVF RGYVDDLVAL LRP