Gene Sros_8422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8422 
Symbol 
ID8671756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9293157 
End bp9294356 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content76% 
IMG OID 
ProductMFS transporter 
Protein accessionYP_003343810 
Protein GI271969614 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAACG TCCTGCTCCT GGCCCTGGGG GCGTTCACTC TCGGCCTGGA CGCGTATGTC 
ATGGCAGGGC TGCTGCCTGT CGTGGCCGCG GATCTCGGCA CCACGGTGTC GCTGGCCGGT
CAGATGGTGA CGGTGTTCAC TCTCGCCTAC GCCGTGTCGG CGCCGCTGGT CACGGGCCTG
CTGTCGCACC TGCGGCCCAG AACGACGTTG GTGGCGGCCC TCGCGCTGTT CAGCCTCGGC
AACGGGCTCA CCGCGCTCGC CCCCTCGCTC GCCCTGCTGC TCGCCTCCCG GGTGCTGGCC
GGAGTGGGCG CCGGGGTGTA CTCGGCGCTG TCCACCGCCG CCGCCTCCGC GCTGGTGCCC
GGGGAGCGGC GCGGGCGGGC GCTCGCCCTG GTGATGGGCG GGATGAGTTC CGGGACGGTG
CTGGGAGTGC CGCTGGGGGT GCTGCTCGCC GGGCACACCG GCTGGCGGGC CACGATGTGG
CTGATCACGG CGCTGGGCGC GGCCGCGATG GTCGGGCTGG CCGCGCTGCT GCCTCCGGTG
CCGGCGGAGC CGCCCGTCCC GGTACGGACC CGGCTCGCGG CCTTGACCGA CCGCGTGGTG
GCTCCGGTGG TCGCGGTGTC GTTCCTGGCC GCCGTGGCCA GCCTCGGTCT CTACACCTAT
CTCGCGCCGG TGCTGGAGTC GGCGGGCGGC GTGCACGAGG TGGCGCCCTA CCTGTGGGCC
TGGGGGGCGG GCGGGGTGCT CGGAAGTGTC GCGGTGGGCC CGCTGGTCGA CCGTACGGGT
CGGGTCCTCG CGCTCGTGGG CGGGGTGCTC GCCGCGATCG CGCTGACGCA GGCGCTCCTG
CCCCCGCTGG CCGGAGGGAT GCTGCCCGCC GCGGCCGTGG CGATGGTGAT CTGGGGTGCG
GCGGGTTGGG CGCTCCAGGT GCCGCAGCAG CATCGGCTGC TCGCGCTGCG GGCCGAGCGC
GGCACGGTCG CGCTGGCTCT GAACAACTCG GCTCTCTACT TGGGCAGCGC GGTCGGCTCG
GCGCTGGGCG GGCTGGCCCT CTCGGCGGGC ATCGCGGCGT ACGCGCTGCC GTGGGCCGCC
TCGGGGGTGG CGGCACTGGC GCTGGTGCTC CACCTCGCGA CGGTGACCCG GGGACGGCGG
ATCCGGGCCC GCCGCGCGCG CGGCGATGCC GGACCGCGTC CGGCCGGCTG CACGCGATGA
 
Protein sequence
MRNVLLLALG AFTLGLDAYV MAGLLPVVAA DLGTTVSLAG QMVTVFTLAY AVSAPLVTGL 
LSHLRPRTTL VAALALFSLG NGLTALAPSL ALLLASRVLA GVGAGVYSAL STAAASALVP
GERRGRALAL VMGGMSSGTV LGVPLGVLLA GHTGWRATMW LITALGAAAM VGLAALLPPV
PAEPPVPVRT RLAALTDRVV APVVAVSFLA AVASLGLYTY LAPVLESAGG VHEVAPYLWA
WGAGGVLGSV AVGPLVDRTG RVLALVGGVL AAIALTQALL PPLAGGMLPA AAVAMVIWGA
AGWALQVPQQ HRLLALRAER GTVALALNNS ALYLGSAVGS ALGGLALSAG IAAYALPWAA
SGVAALALVL HLATVTRGRR IRARRARGDA GPRPAGCTR