| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8393 |
|---|
| Symbol | |
|---|
| ID | 8671727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 9264336 |
|---|
| End bp | 9266428 |
|---|
| Gene Length | 2093 bp |
|---|
| Protein Length | 697 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003343781 |
|---|
| Protein GI | 271969585 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.671179 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATTGA GAGGGCTGGC CCTTCCGCGA GGACCCGGCA CGGGGAAAAA TTTTTTTTCA
GCCCGTGGTC CCGGCAGGAC TGCCTTCAAC GGAGATTTAG GCAGGCCAAG CTGACGACGT
TCCGAGACCT CGGAGTCACA CCGGAGATCG CCGATGCCCT CGAGACCGAG GGCATCATCA
CGCCGTTTCC CATCCAGGAG ATGGCACTCC CCCTGGCCCT CAACGGCCAG GACATCATCG
GCCAAGCGCG CACCGGCACC GGCAAGACCT ACGCCTTCGG CGTGGCGATG CTGCAGCGTG
TCGGCAAGCC CCGGAAGAAC CGCAAGAAGC CCCGCGGGCT GGTCGTCGTG CCGACCCGCG
AGCTGGCCGT CCAGGTCACC GAAGACCTGG TGACGGCCGC CGGCAAGCTC GGCTCGCGGA
TTCTCACCGT CTACGGCGGG CGCGCCTACG AACCCCAGGT CGAAGCGCTC AAGCAGGGCG
TCGACGTGAT CGTCGGCACC CCCGGGCGCC TGCTCGACCT GGTCAAGCAG AAGCACCTCG
ACCTCGGCCA GATCGACGTT CTCGTCCTCG ACGAGGCCGA CCGCATGCTC GACCTGGGCT
TCCTGCCCGA CATCGAGCGC ATCATCAAGC TCATCCCGGA GAAGCGGCAG ACGATGCTGT
TCTCCGCGAC CCTGCCGGGC GAGATCGTCG CCCTGTCCCG GCGTTACCTC ACCCGCCCCA
CCCACGTGCG GGCCGAGAAC AACGACGCCG AGGCCGAGGC GACGCCGCAG ACGACCCAGT
TCGTCTGGCG CGCGCACCGG ATGGACAAGA TCGAGATCGT GGGCCGTCTG CTCCAGTGCG
ACGGGCGCGG GCTCACGATG ATCTTCTGTG AGACCAAGCG CGCCTGCGAC ATGGTCGTCG
AGCAGCTCAA GGAGCGCGGC TTCGCCGCCG CGGCCGTTCA CGGAGACCTG GGCCAGGGCC
AGCGCGAGCA GGCTCTGCGG GCCTTCCGCA ACGGCAAGAT CGACGTGCTG GTCGCGACCG
ACGTCGCGGC GCGCGGCATC GACGTCGACG ACGTCACGCA CGTCGTCAAC TACGACTGCC
CGCAGGACGA GAAAGCCTAC GTGCACCGGA TCGGCCGCAC CGGCCGGGCG GGCAAGACCG
GCGTCGCGGT GACCTTCGTG GAGTGGGAGG ACCTCACTCG CTGGAAGGTC ATCAACAACG
CGCTCTCGCT CGACTTCGCC GAGCCGGTCG AGACCTACTC GACCTCCCCG CACGTCTTCA
GCGACCTGGG CATCCCCGAG GGCACCAAGG GCGTGCTGCC GCACGCCAAC CGGTCCCGGG
CGGGCCTGGC CGCCGAAGAG GTCGAGGACC TCGGCGAGAC CGGCCGTGTC CGCTCCCGCG
GTCCCCGCAG GGGACGCGAG GAGGAGCGGG ACGAGCGACG CGAGCGCCCC GCCCGCACTC
CCCGGGAGCG CCGCCGCACC CGCGGGGGCC GTACCGGCGC GGACGCCACG GAGCCCGTGG
AGAACGTACG GGAGGAGACG GTCGCCGAGG CCGCGCCGGT CGAGGAGCCC CGGCGTCGCC
GCTCACGCGC CGGCCGTGCC GCCGAGGAGA CCCCGGTTCC GGTCACGGAG CAGGAGATCC
AGAGCCCGGT CGTCGAGCTC ACCGAGGTGG AGGTGGACGT GACGTCTCGT AAGGATGACA
ACCGTGACGA CCAGCCCGCC GAGACCGCGC CCCGCCGGGG CCGGACCCGG AAGGCCGGGC
TGAACCCGGA GGTGAGCCTC ACCGAGGGCA CCGGGGTTCA GTCGCGCAGG GAGCCCGTGG
CGGAGCAGGC CGACAGGCCG CGCCGCAGGC GGGAGCCGGT GGCCGAGGTT CCGCAGTGGG
AGGATGAGTC CGTGGACGGT CATTGGGACG ACGAGCCCGT GGCGGAGGCG CCCGCGCCCC
GGCCGCAGCC GGAGAAGATC ATTCCGGCGA GTCCGTTCTC GGTGATCTTC CAGTCGCCCG
ACCTGGCGAC GGACGACGAC GAGATCGCCC CGTCGGCGGC CTCCGAGAGG GCGCAGAGCC
GCCGTCGCCC GCCGAGCAGG GGCCAGCAGC GGGGCCCACG CCGCCCGAGC TAG
|
|---|
| Protein sequence | MTLRGLALPR GPGTGKNFFF SPWSRQDCLQ RRFRQAKLTT FRDLGVTPEI ADALETEGII
TPFPIQEMAL PLALNGQDII GQARTGTGKT YAFGVAMLQR VGKPRKNRKK PRGLVVVPTR
ELAVQVTEDL VTAAGKLGSR ILTVYGGRAY EPQVEALKQG VDVIVGTPGR LLDLVKQKHL
DLGQIDVLVL DEADRMLDLG FLPDIERIIK LIPEKRQTML FSATLPGEIV ALSRRYLTRP
THVRAENNDA EAEATPQTTQ FVWRAHRMDK IEIVGRLLQC DGRGLTMIFC ETKRACDMVV
EQLKERGFAA AAVHGDLGQG QREQALRAFR NGKIDVLVAT DVAARGIDVD DVTHVVNYDC
PQDEKAYVHR IGRTGRAGKT GVAVTFVEWE DLTRWKVINN ALSLDFAEPV ETYSTSPHVF
SDLGIPEGTK GVLPHANRSR AGLAAEEVED LGETGRVRSR GPRRGREEER DERRERPART
PRERRRTRGG RTGADATEPV ENVREETVAE AAPVEEPRRR RSRAGRAAEE TPVPVTEQEI
QSPVVELTEV EVDVTSRKDD NRDDQPAETA PRRGRTRKAG LNPEVSLTEG TGVQSRREPV
AEQADRPRRR REPVAEVPQW EDESVDGHWD DEPVAEAPAP RPQPEKIIPA SPFSVIFQSP
DLATDDDEIA PSAASERAQS RRRPPSRGQQ RGPRRPS
|
|---|
| |