Gene Sros_8354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8354 
Symbol 
ID8671688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9221022 
End bp9222359 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC1 family protein 
Protein accessionYP_003343745 
Protein GI271969549 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.114223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.413243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGACC TTCCGCGCCG CGCCGTTGCG CGCTCCGCCA AGCTGGCGGC CCTCCCTATC 
GGGTTCGCCG GCCGCACCGC TCTCGGGCTG GGAAAACGGA TCGGGGGCAA GCCCGCAGAG
ATCGTCGCCC AGGAAATCCA GCAACGCACC GCCGAGCAGA TCTTCAAGGT TCTGGGAGAG
CTCAAGGGCG GGGCGATGAA GCTCGGCCAG GCGTTGTCCA TCTTCGAGGC CGCTCTGCCT
TCGGAGGTCG CCGGGCCGTA CCGTGCGACT CTGACCAAGC TGCAGGACGC CGCTCCGCCG
CTGCCCGCCA CCACCGTGCA CAAGGTCCTC GTCGAGCAGT TGGGGGACGA CTGGCGGGAG
AACTTCCAGT CGTTCGAGGA CAGGCCGACC GCCGCCGCGT CGATCGGGCA GGTGCACAAG
GCCGTCTGGC ACGACGGCCG GACGGTCGCG GTCAAGATCC AGTATCCGGG GGCGGGCAAG
GCACTGCTGT CCGACTTCAC CCAGCTGGCC AGGCTCGGCA AGCTCTTCGG CGTGCTGCTG
CCCGGCCTCG ACATCAAAGC CGTGCTCAGC GAGCTGCGTG AGCGGGTGGT CGAGGAGCTC
GACTACCTCC GCGAGGCGGA GGCCCAGCAC GCCTTCGCGC TGGAGTACAA GGACGACCCC
GACTTCCTGG TCCCGGACGT CATCGCCGCC AACGAGCAGG TGCTCGTCTC CGAGTGGGTG
GACGGCACCC CGCTGTCACG GATCATCACC GGCGGCACCA AGGAGGAGCG CGACCGCGCG
GGGCTTCTCC TCGTCCGGTT CCTGTTCTCC TCCCCCGCCA GGGTCGGCAT GCTGCACGCG
GACCCCCATC CGGGGAACTT CCGGGTCCTG GAGGACGGGC GGCTGTGTGT GCTCGACTTC
GGCGCCGTCA ACCGGCTGCC GGACGGCTAC CCGGCGGTCT TCGGGAAGCT GACCCGCATC
TTCAACAACG GCGACATGGC GAACGTGGTC CAGGGCCTGC GGGACGAGGG GTTCATCCTC
CCGCACATCG AGGTGGACAT GGAGGCGCTG CGGGCCTTCC TCTCCCCCTA CATCGAGCCG
ACCGCGGTGG AGGAGTTCAC CTTCAGCCGG GAGTGGCTGC AGCACCAGGC GGCCACGGTC
ACCGACCTGC GCCCCGGCAA CGTGGTGCGC CAGCTCAACC TGCCGGTGTC CTACGTTCTC
ATCCACCGGG TGCACGCGGC CGGGATCGGA GTGCTCTGCC AGCTCGGCAC CACCGCCCGT
TTCCGCGAAG AAGTGATCCG TTGGGTTCCC GGCTTCACCG AGGAGGATCC CGAGGAGCAC
GCGGTCGCCG CGAGCTGA
 
Protein sequence
MSDLPRRAVA RSAKLAALPI GFAGRTALGL GKRIGGKPAE IVAQEIQQRT AEQIFKVLGE 
LKGGAMKLGQ ALSIFEAALP SEVAGPYRAT LTKLQDAAPP LPATTVHKVL VEQLGDDWRE
NFQSFEDRPT AAASIGQVHK AVWHDGRTVA VKIQYPGAGK ALLSDFTQLA RLGKLFGVLL
PGLDIKAVLS ELRERVVEEL DYLREAEAQH AFALEYKDDP DFLVPDVIAA NEQVLVSEWV
DGTPLSRIIT GGTKEERDRA GLLLVRFLFS SPARVGMLHA DPHPGNFRVL EDGRLCVLDF
GAVNRLPDGY PAVFGKLTRI FNNGDMANVV QGLRDEGFIL PHIEVDMEAL RAFLSPYIEP
TAVEEFTFSR EWLQHQAATV TDLRPGNVVR QLNLPVSYVL IHRVHAAGIG VLCQLGTTAR
FREEVIRWVP GFTEEDPEEH AVAAS