| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8296 |
|---|
| Symbol | |
|---|
| ID | 8671624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 9158465 |
|---|
| End bp | 9159985 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003343687 |
|---|
| Protein GI | 271969491 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.365652 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGCGCA TCCTCCTCCC CGCCGGCGGC GCCATCCTCG CCACCGGCAT GCTGGCCGCC
GGTCTGGCCG GTACCGCCAA CGCCAACCCG GACTGGGCCT ACGACACGAT GGCCAAGGAC
GCTCCGTCCG CCGTCGAGGT CGCCAAGTTC TGGCTCGCGG CCAACGAGCA CACCAACAAC
CTCGCCAAGG CCGTCCCCTA CACCTGGGAG ACCAAGGCGA CGCCGAAGCT GAACGCGGGC
GGCGGCTACA CCCCCGACGG TAAGCCCGGC ACCATCGCCC CCATCGGCGA GGAGAAGAAG
ACCGCGGCGA AGATCAAGAA CATCAACCTG CCGCGCACCA TCGGCAAGGT GTTCTTCGTC
GACTCCGAGG GTGGCCTGAA GTGGTGCTCC GCCACTTCGA TCCAGTCGAA GTACCGCAAC
CTGGTTGCGA CCGCGGGTCA CTGCGTCTAC GACGACAAGA AGAACGCCAG CGTCATGGAC
AAGTGGGTCT TCGTCCCCGC TTACTACCAG GGCAAGACCC CTTACGGCAT CTTCGTCGGC
AAGCAGGCCT ACACCCACTA CGACTACAGC GTCTACAACG ACCGCGACCG CGACTACGCG
TTCGTGACCG TTTACAACGG TGTGCAGATC GGTGGCGGCA CCCCCAAGGT TGTCAACAAG
GCTGCCTACG ACGCTTTCGC CGGCGCCAAG TTCAGCAAGG ACACCGCGAT CACCGCGGAG
GAGTACCAGA AGACGGTCGA CCTCCACGGC GGCGAGACCT CCGACGCGTG GGCCAAGGCC
GAGACCATCA AGGACCCGGT CGGCTCCAAC TACCCCGGCG CCGTCCTGGC TCTGCAGGAA
GTCAGCAAGG ACGTCTACGA CAAGGCCCCG ACGGGCCAGG GCGTCAGCGG CGCCAAGGCC
ATCTGGGCGA GCGGCAAGCC CACCTACGTC ACCAAGTCGG AGTACGAGGC CTACACCGGC
CCGGGCTACC GCAAGATTGA CGAGAAGGGC AACTTCACCA TCACCAAGTA CTTCCTCAAG
TACTGGGTGA AGAAGACCGA CGTCAAGTCG TACTACAAGA CGACCTTCTA CGTCGTCGAC
GGCTTCATCC AGGACACCGG CTCCCTCGGC AACGCCGTTG GTGGCCAGGG CTTCACCTGG
AACCAGAAGA CCGGCCAGAC GGTGTTCGCG TTCGGCTACC CGGCCGACGC TCACCCCGAC
GGCAACAAGG CCTACACCGG CGTTACGCCG AAGTGGACCT ACGGCAAGAC CTCGGGCAAG
GTGTACGTCT CCGCCGCGGA GAAGGTTGAG GAGCACGTTG GCCTCAAGTC CTCCTTCACC
CCCGGCGCCG ACGGTGGCCC GTGGCTCGTC AAGTACAGCA ACGCCAAGCG TCTCGGCTAC
GTCAACGGCG TGACCAGCCT CTTCGGCGAC CAGGACAAGA ACAACCGCTA CGACCTCATC
ACCTCGCCGT ACTTCGACGG TGAGACCGCC ACCATCTACA ACAAGGCGGC CGCTGTGTGG
TCCGGCTCGA TCGTCAAGTA G
|
|---|
| Protein sequence | MKRILLPAGG AILATGMLAA GLAGTANANP DWAYDTMAKD APSAVEVAKF WLAANEHTNN
LAKAVPYTWE TKATPKLNAG GGYTPDGKPG TIAPIGEEKK TAAKIKNINL PRTIGKVFFV
DSEGGLKWCS ATSIQSKYRN LVATAGHCVY DDKKNASVMD KWVFVPAYYQ GKTPYGIFVG
KQAYTHYDYS VYNDRDRDYA FVTVYNGVQI GGGTPKVVNK AAYDAFAGAK FSKDTAITAE
EYQKTVDLHG GETSDAWAKA ETIKDPVGSN YPGAVLALQE VSKDVYDKAP TGQGVSGAKA
IWASGKPTYV TKSEYEAYTG PGYRKIDEKG NFTITKYFLK YWVKKTDVKS YYKTTFYVVD
GFIQDTGSLG NAVGGQGFTW NQKTGQTVFA FGYPADAHPD GNKAYTGVTP KWTYGKTSGK
VYVSAAEKVE EHVGLKSSFT PGADGGPWLV KYSNAKRLGY VNGVTSLFGD QDKNNRYDLI
TSPYFDGETA TIYNKAAAVW SGSIVK
|
|---|
| |