| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8293 |
|---|
| Symbol | |
|---|
| ID | 8671621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 9153382 |
|---|
| End bp | 9154938 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003343684 |
|---|
| Protein GI | 271969488 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACACCC GAGCCAAGCG CCTGGTCCTC CCCCTCGGTG GTGCCCTCGT GGCCACCACC
ATGATCGGCG CCCCCCTCGC AAGCGCTGCC CAGGCCGCGC CCGCGCCCGA CGTCAAGTCG
TCGTCGCTCA CCTCGTCCGG CAACGCGAAG GCCATCGCGG GCTACTGGAC CTCCTCCAAG
CTCAAGTCGG CGAAGAGCTA CATCTCCGAC TCCACCGTCT CCGCCAAGCT GACGAAGACC
GGCGCCGCCA AGGCCGCCGC CGACGGCAAG CCCGGCACCA TCGCCCCCAC CGGTGAGGGC
GGCAAGTCCG CGGGCAAGTC GAAGAACCTG AACCTGCCGA TCACCGTGGG CAAGGTCTTC
TTCGTTGACG GCAAGGGCCA GGAGCGCTGG TGCTCCGGCA CCTCGGTGCA GTCGAAGTAC
CGCAACCTGG TCGCCACGGC GGGCCACTGC GTGTACGACA CCGACACGAA CAAGCCGTTC
GACAACTTCG TGTTCATCCC CGGCTACTAC CAGGGCAAGG CTCCCTGGGG CATCTACGTC
GGCGCCAAGG TCAACACCCA CGACGACTTC ACCGTCTTCG AGGACTACGA CTACGACTAC
GCCTTCGTCA ACGTCTATGA CGGCGTCAAG CAGCAGGCGG AGAAGGAGGT CGACTACAAG
ACCTACAAGG CGCACATCGA CAAGGGCGGT GTGGGCCGCG AGGACGCCAA GACCGTCGAC
TTCGAGACCT ACGACAGGTG GACCCAGAAG GGCGGCCTCG GCAAGGTCGA GAACGTCTCC
TCCGAGGACG AGGTCGGCCC GCAGTTCAAG GGTGCCCTCG CCGTCGCGTC CGAGATCGAC
AAGTGGGCCT GGGAGAAGGT CGACGGCGAC GTCTACGGGC TGAAGGACGA CAAGGTCACC
CTCAAGGGCA AGACGCTGGA CCAGGAGGCG TGGCCCAAGA GCGGCTCCAA GCTGGAGAGC
CGCGTCGAGC CCGTCACCAA GTCCGAGTAC GACGCCTACA AGGGCTCGGG CTACAAGAAG
ATCGACGCCA AGGGCAACTA CACCATCACC CACTACTACG TGGTGAAGTA CATCAAGAAG
ACCGCGTCCG TGAAGTACGT GATCTTCCGT CACTACATCA CCACCGTGGC CTCCGCCGGC
CGTCTCGGGG ACAACGTCGG CGGCCAGGGC TTCACCTGGA ACCAGAAGCT GGGCAAGAAG
GTCTTCACCT TCGGCTACCC GACCGCCGCC CACCCGGACG GCAACAAGCC CTACTCCGGG
CACACCATGA AGTGGTGCTA CGGCACCACC AGCGCCGCCC CCGTCGTCCC GGCGTACAAG
GCCGAGGAGC ACCAGGCGAT CAAGTGCGCC TTCACCCCGG GGGCCAGCGG CGGCCCGTTC
CTGCTGCAGT ACAAGAGCAG CAAGCGGACC GGCTACCTCA ACGGCGTCGT GAGCCTGACG
GTCGACAGCG ACAAGAACAA CCGCTACGAC CGGGTCACCA CCCCGTACTT CAACGGTGAG
ACCTACGGCA TCTACAAGCA CGCCGCCAAC CTCTGGACCG GGAAGCTCCC CGGCTAG
|
|---|
| Protein sequence | MNTRAKRLVL PLGGALVATT MIGAPLASAA QAAPAPDVKS SSLTSSGNAK AIAGYWTSSK
LKSAKSYISD STVSAKLTKT GAAKAAADGK PGTIAPTGEG GKSAGKSKNL NLPITVGKVF
FVDGKGQERW CSGTSVQSKY RNLVATAGHC VYDTDTNKPF DNFVFIPGYY QGKAPWGIYV
GAKVNTHDDF TVFEDYDYDY AFVNVYDGVK QQAEKEVDYK TYKAHIDKGG VGREDAKTVD
FETYDRWTQK GGLGKVENVS SEDEVGPQFK GALAVASEID KWAWEKVDGD VYGLKDDKVT
LKGKTLDQEA WPKSGSKLES RVEPVTKSEY DAYKGSGYKK IDAKGNYTIT HYYVVKYIKK
TASVKYVIFR HYITTVASAG RLGDNVGGQG FTWNQKLGKK VFTFGYPTAA HPDGNKPYSG
HTMKWCYGTT SAAPVVPAYK AEEHQAIKCA FTPGASGGPF LLQYKSSKRT GYLNGVVSLT
VDSDKNNRYD RVTTPYFNGE TYGIYKHAAN LWTGKLPG
|
|---|
| |