Gene Sros_8278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8278 
Symbol 
ID8671606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9135140 
End bp9136186 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content73% 
IMG OID 
ProductZn-dependent hydrolase including glyoxylase- like protein 
Protein accessionYP_003343669 
Protein GI271969473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0643928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACGG CGGCGAACGA GGCACAGCGC GAGGCCTGGC GGGCCGGGGG GTTTCCCGAG 
GTGGAACGGG TGCGGCCGGG GCTCTGGTCG ATCCCGGTGC CGATCCCGAT CAATCCTCTC
CGCTACGTGC TGGTCTACGC CCTCGAACTC CCCGACGGGG TGGCGATCGT GGACGCGGGG
TGGGACACCG ACGAGGCGTA CGGCGCGCTG GCCGCCGGGC TCGGGACCGC CGGATACGAG
GTGACCGACG TCAGGGCCGT CCTGGTCACC CACATCCACC CCGACCACTA CGGGCTGGCC
GGGCGGATCC GCGAGGTGTC GGGCGCCTGG ATCGGGCTGC ACCCGGCGGA CTCCCGGCTG
CTGCGCGACC GCTACGACGA GGCCGGCGTC GACGACCTGG TGGCGCGGGA GCGCCTGCTG
CTGGTGCGGT CCGGCGTGCC GCTGCCCCTG CTGGACGAGC TGGCCGGGGC CTCGATGATG
CTCCGGCACT ACGTGACCAT GGCCAGGCCC GACCGGCTGA TCGAGGACGG CGACCTCCTC
GGCCTGCCCG GCTGGGACCT GCGTGCGGTC TGGACCCCCG GTCACTCGCC GGGGCACGTG
TGCTTCGTCG AGCAGGAGCG GCGGCTGCTG TTCTCCGGCG ACCACGTGCT CCCCCGGATC
ACGCCCATCG TGGCGGTCCA TCCGCAGTCC GCGCCCAACC CGCTCGCCGA CTATCTTGAG
GCGCTGGCGG CGGTGCGCAA GTTCGACGTG GACGAGGTGC TGCCCGCGCA CGAGTACCGG
TTCCTGGAGC TGGCCGACCG GGTCGACCAC GTGATCGCCC ACCATGAGGA GCGGCTGGCC
GAGATCGAGA CGGTGGTCGG CGCCGGGGAC GGGATCACCT GCTGGGACGC GGCGACCAGG
CTGCGATGGG CGCGCCCGTG GGAGACCATC CCGCCGTTCA TGCGCCGGGG GGCGAACAAC
GAGACGCTGG CGCACCTGGT CTGGCTGGAG GCCAGGGGAC GGCTGCGCCG GGTCGCCGGG
GAGCCCGACC TGTGGTTTCC CGCGTAA
 
Protein sequence
MVTAANEAQR EAWRAGGFPE VERVRPGLWS IPVPIPINPL RYVLVYALEL PDGVAIVDAG 
WDTDEAYGAL AAGLGTAGYE VTDVRAVLVT HIHPDHYGLA GRIREVSGAW IGLHPADSRL
LRDRYDEAGV DDLVARERLL LVRSGVPLPL LDELAGASMM LRHYVTMARP DRLIEDGDLL
GLPGWDLRAV WTPGHSPGHV CFVEQERRLL FSGDHVLPRI TPIVAVHPQS APNPLADYLE
ALAAVRKFDV DEVLPAHEYR FLELADRVDH VIAHHEERLA EIETVVGAGD GITCWDAATR
LRWARPWETI PPFMRRGANN ETLAHLVWLE ARGRLRRVAG EPDLWFPA