| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8257 |
|---|
| Symbol | |
|---|
| ID | 8671585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 9115526 |
|---|
| End bp | 9116587 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | periplasmic ribose-binding protein |
|---|
| Protein accession | YP_003343649 |
|---|
| Protein GI | 271969453 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.01712 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAA GAGTCGCCCG TCGGGGTTTC CTGGTCGGTG GAGCCGTCAT CGGCGCCGGC
GCGCTGGTGA CCGCGTGCAC CGGCAACACC CCGGCCCCCG AGGCAGCCGC CTCCAGCGCG
GCACCGGCAC CGGCGGCCAC CGGCGGCAAC GATGCCCCCG GTGACAAGGT CGTCATCGGG
TTCTCGGCGC CGGCGGCCGA TCACGGCTGG ATCGCCGCGA TCGCCAAGAA CGCCGAGGCC
GCGGCCAAGC AGTACAGCGA TGTGGAGTTC AAGCCGGTCG AGCCGACCAA CGACATCAAC
GCGCAGATCT CGGCGGTGGA GTCGCTGATC GCGGCGAAGG TCGCCGCGCT GGTGATCCTG
CCCAACGACG GCCAGCAGCT CAACCAGATC GCCCGTCAGG CCTCCGACGC GGGCATCCCG
GTGATCAACC TGGACCGGGT CTTCCCGGAC AAGCTGTCGT ATCGCACCTG GATCGGCGGC
GACAACTACG GCATGGGGGT CGCGGCCGGG CATTACATCG GCAAGACGCT CAAGGACAAG
GGGGTGGCCG ACCCGGTGAT CCTGGAGATC CAGGGCATCG CGACGCTGCC GCTGACCCAG
GATCGCAGCA AGGGCTTCGA GGACGCGCTG AAGACGTACG GGTTCAAGGT GACGGCCAAG
CAGGACGCGC AGTTCACGGT GGAGTCGGGC ACGAAGGTGA CCAGCAACCT GCTGCAGGCG
CACAAGAAGA TCGACGCGAT CTGGAACCAC GACGACGACC AGGGCATCGG GGTGCTGGCG
GCGGTCAAGG AGGCCGGTCG CAGCGAGTTC TTCATGGTGG GTGGGGCCGG ATCGGCCAAC
GCGATGCGGG AGATCCAGGC CGACAGCGGG GTGTTGAAGG CCACCGTGAC CTACAGCCCG
ACGATGGCCG CCTCGGCGGT GAAGCTGGCC CGGTTGATCG CGCAGGGCAA GGGGATGAGC
GATCTGCTGG AGAACCAGGT GCCGCAGTCG ATCACGCTGG CCTCCGAGAC CATCACCAAG
GACAACGTGG CGAAGTACCT GCCGCTGGGA TTCGAGTCCT GA
|
|---|
| Protein sequence | MTERVARRGF LVGGAVIGAG ALVTACTGNT PAPEAAASSA APAPAATGGN DAPGDKVVIG
FSAPAADHGW IAAIAKNAEA AAKQYSDVEF KPVEPTNDIN AQISAVESLI AAKVAALVIL
PNDGQQLNQI ARQASDAGIP VINLDRVFPD KLSYRTWIGG DNYGMGVAAG HYIGKTLKDK
GVADPVILEI QGIATLPLTQ DRSKGFEDAL KTYGFKVTAK QDAQFTVESG TKVTSNLLQA
HKKIDAIWNH DDDQGIGVLA AVKEAGRSEF FMVGGAGSAN AMREIQADSG VLKATVTYSP
TMAASAVKLA RLIAQGKGMS DLLENQVPQS ITLASETITK DNVAKYLPLG FES
|
|---|
| |