| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8255 |
|---|
| Symbol | |
|---|
| ID | 8671583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 9113293 |
|---|
| End bp | 9114300 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | xylose isomerase domain-containing protein |
|---|
| Protein accession | YP_003343647 |
|---|
| Protein GI | 271969451 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.018151 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCGAC CCATCACGCT GTTCACCGGC CAGTGGGCCG ACCTGCCGTT CGAGGAGGTG
TGCCGGCTGG CCGCCGGGTG GGGCTACGAC GGCCTGGAGA TCGCCTGCTG GGGCGATCAC
TTCGAGGTCG ACAAGGCCCT GGCCGACGAC TCCTACGTCG AACGCAAACA AGCGGTGCTG
GCCGAGCACG GCCTCAAGGT GTGGGCGGTC TCCAACCACC TGGTCGGCCA GGCCGTGTGC
GACCACCCCA TCGACGCCCG GCACAAGGCC ATCCTGCCGG CCCGCATCTG GGGCGAGGGC
GACGCCGAGC AGGTGCGCCG CCGCGCCGCC GAGGAGATCA AGGACACCGC GCGGGCCGCG
GCCAGGCTGG GGGTGGACAC GGTGGTCGGG TTCACCGGCT CGGCCATCTG GCACACCGTG
GCGATGTTCC CGCCGGTGCC GGCGGCGATG ATCGAGGACG GCTACGCCGA CTTCGCCGAC
CGGTGGAACC CCATCCTGGA CGTCTTCGAC GAGGTCGGGG TGCGTTTCGC GCACGAGGTG
CATCCCAGCG AGATCGCCTA CGACTACCAC ACCACGGTGC GGACCCTGGA GGCGATCGGG
CACCGGCCGG CGTTCGGGCT GAACTGGGAC CCCTCGCACA TGGTGTGGCA GCAGATCGAC
CCGGTGGGGT TCATCCTGGA CTTCGCCGAG CGGATCTACC ACGTCGACTG CAAGGACGCC
AAGGTCCGTA CCGGTGACGG CCGGCGTGGC CGGTTGGCCT CGCATCTGCC GTGGGCCGAC
CCGCGGCGGG GCTGGGACTT CGTCTCCACC GGACGCGGGG ATGTGCCGTG GGAGGAGTGT
TTCCGGGCGC TGAACGCCAT CGGGTACACA GGGCCGATCT CGATCGAGTG GGAGGACGCG
GGGATGGATC GGCTGGCCGG GGCGCCGGAG GCGCTCGGGG TGATCCGCGG GCTCAACGCG
ATCACCCCGC CGGCCACCGC CTTCGACTCC GCCTTCTCCT CGGAGTGA
|
|---|
| Protein sequence | MTRPITLFTG QWADLPFEEV CRLAAGWGYD GLEIACWGDH FEVDKALADD SYVERKQAVL
AEHGLKVWAV SNHLVGQAVC DHPIDARHKA ILPARIWGEG DAEQVRRRAA EEIKDTARAA
ARLGVDTVVG FTGSAIWHTV AMFPPVPAAM IEDGYADFAD RWNPILDVFD EVGVRFAHEV
HPSEIAYDYH TTVRTLEAIG HRPAFGLNWD PSHMVWQQID PVGFILDFAE RIYHVDCKDA
KVRTGDGRRG RLASHLPWAD PRRGWDFVST GRGDVPWEEC FRALNAIGYT GPISIEWEDA
GMDRLAGAPE ALGVIRGLNA ITPPATAFDS AFSSE
|
|---|
| |