| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8249 |
|---|
| Symbol | |
|---|
| ID | 8671577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 9104748 |
|---|
| End bp | 9109253 |
|---|
| Gene Length | 4506 bp |
|---|
| Protein Length | 1501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | Polyketide synthase modules and related protein- like protein |
|---|
| Protein accession | YP_003343641 |
|---|
| Protein GI | 271969445 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00620759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTCG CGATCGTGGG ATTGGCCTGC ACCTATCCGG ACGCGCCCGA TCCGGGGGCA
CTGTGGGAGG CGGTGGTGTC GCGGCGGCGG GCGTTCCGGC GCCTGCCGGT CGAACGGCTG
GACCTGGCCG ACCACCACTC CCCCGACCGG TCGGCCCCCG ACCGGACCCA CAGCACCCGT
GCCGCCCTGA TCGAGGGCTG GGAGTTCGAC CGGGCCGCCT TCGGCGTCCC CGACCCGGTC
CACCGCGTCA CCGACCCGGC CCACTGGCTG GCCCTGGACA CCGCGTCCCG CGCCCTGGCG
GACGCGGGCT CGCCCGGCGG GGAGGGGCTC GACCGGGACC GGGTCGCGGT GGTCGTCGGC
GACACCCTGA CCGGCGAGGT CGCCCGGACC TCCGCGCTCC GGCTGCGCTG GCCGTACGTG
CGGCGCGTGC TGTCCTCGGC CCTGGCCGAG CTCCCCGAGG AGACGACCGC CCGGCTGCTG
GCCCAGGCGG AGGCCGAGTA TCTGCGGCCG CTGCCCGAGA TCTCCGGGGA GAGCCTGGCC
GGCACGGTCG CCGCGCGCAT CTGCAACCAC TTCGACCTGC GCGGCGGCGG ATACACGGTG
AACGGCGGAT GCGCCTCGTC CCTGCTGGCG GTGATCACCG CCTGCCGTTC GCTGCTGGAC
GGAAGCGTGG ACTTCGCGCT GGCCGGAGGC GTGGACCTCG GCCTCGACCC GTTCGAGCTG
GTCGGCCTCG CCAAGGCGGG CGCGCTGGCC GGCGAGCGCA TGCGGATCTA CGACACCCGG
TCGGACGGCT TCTGGCCGGG TGAGGGCTGC GGGATCGTCG CCCTGGCGCG TACGGCCGAC
GCCCGCGCCG CCGGGCTCCG GATCCACGCG GAGATCACCG GCTGGGGCGT GTCCTGCGAC
GGCGGGGACG GCGTCGCCCG CCCCGGCGCC GACGCCCGCC CCGAGGCCGA CGGCCGACTC
CTGGCCCTGC GCCGCGCCTA CGCGCACGCG CGTGTCTCCC CCGCCGCCGT CGCCCTGTTC
GAGGGCGCCG GCGCCGGCGA CGACACCGTC GAGCTCACCG CACTCACCCG CCTGCTGGCG
GATGCCGCGC GCCTGTCCGA CGCCGCGCGG CGGGCGGTGA CCGGATCCGG CGCACCGGGC
CGGGCGGCCA CCGGGCCCGG CGCCGTGCGG GGGGCGGCGA TCGGTTCCGT CAGCGCCAAC
ATCGGGCACA CCGGGGCGGC CGCCGGAGTC GCGGGACTGA TCAAGGCCAC CCTGGGCATC
GCCTCCGGCG TCCTGCCCCC GACCACCGGC TGCGGATCCC CGCACCCCCT GCTGACCGCC
CCCGGCGCCC CCCTGCGGGT CCTGGCCGTC CCCGAACCGT GGCCCGCCGG GCCCCGCCAC
GCGGGGGTGA GCGCCACGGG GTCCGGCGGC GTCAACGCCC ACCTCGTCCT GACCGCCCCG
GTGCCGACCG GCGGGGACAG CCGCCCCACC ACGCCGGAGG CCGTACCGGG AGCAGCTCCG
CGACGGCGGG TGACCGACGG GCCCTCGCGG GAGGAGCCGG TGGTGTTCGC GTTCTCGGGT
GAGGGTCTGG AAGCCGTGCG GCCGGTGCTG GAGCGGGTCG CGGACCAGGC GGCGCGGTGG
TCGGAGGCAG AGCTGTGCGA TCTCGCGTAC GCGCTGGGGA CCGTTCCCGC CGGGCCGTCG
CGGATCGCGA TCGTGGCGGG GTCGGCGGAA CAGCTCGCCG AGCGGGCCGC TCTCGCCCTG
GACTGGCTGG ACGGCGCCCA GTCCGGCCTG CCGGCCACCC TGCCGGGGGT GTATCTCGGA
CCGGACGCGC AGGACGGAAC GGCGCCGCCC TCTCCCGCGG GGGTCCCCTC GGCCGAGGCC
GCCGCCGCCC TCTGGGCCGC CATGGCCATC CCGGATCTCA CCGCCCTCTA CGGTGATCAT
CCGGCCCGGC CCGTCGACAT CTGGCGCGAC CGCGTCTTCA TCTCCGGCCC CTGCCCGGCC
GTCCCGTACG GGGGCTCCGA GGCCACCCCC CGAGAGGACG CGGAGGAGGG GGACGACCCG
GACGGGAGGG CGTGCCGGGA GCGGGCGGAC GCCGGGCCGG TGGCCGGCGT GGCGCGCTGG
GTGCGGTGTT TCGCCGACGA CCCGGCGACC GCCGAGCGGC CCGTCCCCGC CGGGACCGGG
GAGGCGCGTC CCGGCGGCCA GACTCCTCCC GCCCCGAACG GGAAGGACCG CCCGGGGAAC
GGGAAGGACC GCCCCGGGAA GGGGAAGGGC CGTCGCGGCG TCCGGCTTGG GGCGGAGGAC
GGAGAGGCGC CGGTCAGGCG GGTCGTGATC GACGATCCGC TGCGGCCGGG GGCGGTCGGG
ACGCTGGTCA CGGCGGTCCG CGAGGCGATC GCGGGCGGCG AGGGGCTGGC CGTGCTCTGC
GAGGGCGACG CCCTGGCCGG GTTCCTGGCG TCGCTGGGGC GGGAGCATCC CGGCCTCGGT
CTCGATGCCG GGCGTCCGTC GGGAAGGGTC CCGCTCACCC TCGACGGGCA GGGGCCGCTC
CCGGTGGGTC CGGGGGACGT GGTGCTGGTC AGCGGGGGCG GCGAGGGGAT CGCGGTCGCC
TGTGCCATGG CGCTGGCCGA GGCGAGCGGG TGCGGGCTGG CCCTGCTCGG GCGGGGACGG
CCGGGCCGCG ACGCGATCCC GGCGGGAGAC CTGGAGGAGC TGGCCCGCAG GGGCGTCCGG
TACGGCTGCG CGACGGCGGA TGCCGGTGAC GCGGGGGAGG CGGCGCACGC CGTACGGGAG
CTGGAGAGCG CGCTGGGGCC GGTCACCATG GTGATCCACC AGGCGGACGC CGACCGGCCG
GACCGGTTCA CCGACCTCGC CGCCGAGGAC GCCGAAAGGC ACGCCGAGGA CGCCGAAAGG
CACATCGTGT CCGGGCTGAC CGGCCTGGAC AACCTGCTGG CCGCGACCAC GCCCCGGCGG
GTGGTGACCT TCGGATCGGT GGCCGGCCGG TACGGCCTGG CCGGCGGGAG CCACCGCGCG
CTGGCCGAGG GGCTGCTGCG GGAGCGGGCC GGAAGGATCG GCGGGCTGCA CATCGACTGG
CCGGTGTGGA CCGGGACCGG CCACGAACGG CGGCCGGGTG CCGCCGGAGC GGAGGTGACG
GCCATCACGC CGCAGGAGGG GGTGGAGCTG TTCCTCACGC TGCTCAGGAC CGGGAACCTG
CCGCCCAGCG TGGCCGTCCA CGGCAGGCTG GGCGGACCCG CCGCCCCCTG CCCGGCGGGA
GGGCGGTTCC TCGACGAGGT CCGCGTGCAC GTCCCCGGCG TGGAGCTGGT CGCCGACAGC
CGCCTGTCGC TCAGCAGCGA CTCCTACCTG GACGACCACC GGATCGACGG CCTGGCGGTA
CTGCCCGCGG TGGTGGCGCT GGAGGCGATG GCGCAGGCCG CCGGAGTGCT GGCGGGGCGG
CCGCTGGACG AGGCCGGGCA GATGACGTTC GACCGGCCGG TGGCCGTGCC CGACGAGGGC
GGCACCACGA TCCGGGTATG CGCGCTCCGG CACGGGCAGA CGGTCGAGGT GGTGGTCCGC
AGCGAGGAGA CGGAATTCCG CGTCGACCAT TTCAGGGCCG TGTTCCCGGT GGACCCGGCC
GACGAGACGC TGGCCGTACC GCAGCTGAAC CGGGACGGCG CCGAGCCGCT GGACGCCGGG
GAGCTGTACG GCGCGCTGTG CTTCCACACC GGCCGGTTCC AGCGGGTCAG GGAGCTGACC
CTCGTCGAGG CGCGGGGATG CCGGGGCGAG TTGCACGGCG ACGACCCCGA CGGCTGGTTC
GAGGACAGGC CGGTGCTGGG CAGCCCGGGG CTGAGCGACG CCACGATCCA CGCGCTGCAG
GCGTGCGTGC CGCACCGGCG GCTGCTGCCG GTCGGCGGCG AGCGGCTGGT GGTCCGCCCG
TCACAGGGGG ACGTGAGGCT GCACGCCACC GAGCGGCACC ACGACGGGGG CGAGTACGTC
TGGGACGTCA CCGCCACCGA CGTGCGCGGG CGGCTGGTGG CGGCGTGGAC CGGGCTGCGG
ATGAAGGACG TCGGCCCGCT CCCCCGGCGT GACCCGTGGC CGCCGAACCT GCTGGCCGTC
TACCTGCAGC GGGCCGCGGT CGCCCTCGGC CTCGATCCGG CGCTGCACGT GACCATGGAC
GGCGGGACGT CCCACAGCCG GCTGGGCGAC CTCGTGCTCG GCGTGGACGG CCCGGCCCAC
TGCTCCTGGG AACGGGTGGG CCGGGCGCGG GGAACGCTGG GACCGGCCTC CGTCTCGCTG
ATCGACGAGC TGCGGCCGTG CTGCGACGAG CCCGAGGAGA CCGTGACCAC CCGGATCTGG
ACCGCTCTCC AATGCCTGTC CGGAGCGGGC CGCCCGCCGA CGACGCCGCT CACCGTCGTG
GACGGCCATG AGGGTGGCTG GCTGCTGCTG CGGGCCGGCG CCGACCTGAT CGCCTCGACG
GTGGTCCGGG TCAGGGGCGT GGAGGAGCCG GTCGCGGTCT CGATCATGAC CGGGGAACGG
CGGTGA
|
|---|
| Protein sequence | MSVAIVGLAC TYPDAPDPGA LWEAVVSRRR AFRRLPVERL DLADHHSPDR SAPDRTHSTR
AALIEGWEFD RAAFGVPDPV HRVTDPAHWL ALDTASRALA DAGSPGGEGL DRDRVAVVVG
DTLTGEVART SALRLRWPYV RRVLSSALAE LPEETTARLL AQAEAEYLRP LPEISGESLA
GTVAARICNH FDLRGGGYTV NGGCASSLLA VITACRSLLD GSVDFALAGG VDLGLDPFEL
VGLAKAGALA GERMRIYDTR SDGFWPGEGC GIVALARTAD ARAAGLRIHA EITGWGVSCD
GGDGVARPGA DARPEADGRL LALRRAYAHA RVSPAAVALF EGAGAGDDTV ELTALTRLLA
DAARLSDAAR RAVTGSGAPG RAATGPGAVR GAAIGSVSAN IGHTGAAAGV AGLIKATLGI
ASGVLPPTTG CGSPHPLLTA PGAPLRVLAV PEPWPAGPRH AGVSATGSGG VNAHLVLTAP
VPTGGDSRPT TPEAVPGAAP RRRVTDGPSR EEPVVFAFSG EGLEAVRPVL ERVADQAARW
SEAELCDLAY ALGTVPAGPS RIAIVAGSAE QLAERAALAL DWLDGAQSGL PATLPGVYLG
PDAQDGTAPP SPAGVPSAEA AAALWAAMAI PDLTALYGDH PARPVDIWRD RVFISGPCPA
VPYGGSEATP REDAEEGDDP DGRACRERAD AGPVAGVARW VRCFADDPAT AERPVPAGTG
EARPGGQTPP APNGKDRPGN GKDRPGKGKG RRGVRLGAED GEAPVRRVVI DDPLRPGAVG
TLVTAVREAI AGGEGLAVLC EGDALAGFLA SLGREHPGLG LDAGRPSGRV PLTLDGQGPL
PVGPGDVVLV SGGGEGIAVA CAMALAEASG CGLALLGRGR PGRDAIPAGD LEELARRGVR
YGCATADAGD AGEAAHAVRE LESALGPVTM VIHQADADRP DRFTDLAAED AERHAEDAER
HIVSGLTGLD NLLAATTPRR VVTFGSVAGR YGLAGGSHRA LAEGLLRERA GRIGGLHIDW
PVWTGTGHER RPGAAGAEVT AITPQEGVEL FLTLLRTGNL PPSVAVHGRL GGPAAPCPAG
GRFLDEVRVH VPGVELVADS RLSLSSDSYL DDHRIDGLAV LPAVVALEAM AQAAGVLAGR
PLDEAGQMTF DRPVAVPDEG GTTIRVCALR HGQTVEVVVR SEETEFRVDH FRAVFPVDPA
DETLAVPQLN RDGAEPLDAG ELYGALCFHT GRFQRVRELT LVEARGCRGE LHGDDPDGWF
EDRPVLGSPG LSDATIHALQ ACVPHRRLLP VGGERLVVRP SQGDVRLHAT ERHHDGGEYV
WDVTATDVRG RLVAAWTGLR MKDVGPLPRR DPWPPNLLAV YLQRAAVALG LDPALHVTMD
GGTSHSRLGD LVLGVDGPAH CSWERVGRAR GTLGPASVSL IDELRPCCDE PEETVTTRIW
TALQCLSGAG RPPTTPLTVV DGHEGGWLLL RAGADLIAST VVRVRGVEEP VAVSIMTGER
R
|
|---|
| |