Gene Sros_8248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8248 
Symbol 
ID8671576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9103756 
End bp9104718 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content76% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003343640 
Protein GI271969444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0300735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCG CCTGGAAGCG CGGCCGGGCG CTCCGCCGCT TCGCCGGGTC GATCACCGTG 
ATGACCGTGC TCGGGCACAC CGTGCTCGGC TTCGAGCAGG CCTACCTGAC ACCGATCGCG
GGCGCGGTCA CCGGGATGAT CGCCGAGTTC GTGCTGGAGA CCGTGGAGGC GTGGGCGTGG
CGGCGCCCGG CCCGCTACCG GGGGACGCCC GGCCAGGTGG CCGACTTCTT CCTCCCCTCC
TACATCACCG GGCTGACCTG CGCGATGCTG TTGTACGGCG GCGCCGACCC GATGCCGGTC
GTACTGGCCG TCCTGATCGG CGTGGGCAGC ACGTACGTCC TGCGGGTCAG GGCGCCGGGC
GTGGCGGGGC ACCGCACCGG CGACACGCCC GGCGGGCACT ACCTGAACCC GTCGTGCTCC
GGCGCCCTCG CCGTGGTGCT GCTGTTCCCG TGGGTCGGCG TCGCGCCGCC GTACGGGCTC
GCCGAATGGG TTCCGGGGCC GCCCGGCTCG CTCGTGCCGC TGGCCGGGCT GGTGCTGGTG
CTGGGCTCGG CGGTGAACGC CGGACTGGTC GGGCGGCTGC CGCTGGTCCT GGGCTGGGTG
GGCGGGTCCG TCCTGCAGGG GCTGGCCCGG GGTGGGCTGA CCGACGTCTC GGTCATCGGC
GCCCTGCTGC CGATGACCGG CGTGGCCTCC GTCCTCGCCA CCGGCTACGT GCTCACCGAC
CTGGGCACGA CTCCCGCCCG GCCGCGTGGC CAGGTCGTGT TCGGCCTGGC CACGGCGGCG
GCACACGGCC TGCTGGTCCA GTTCCACTTC CACGTCGTCT CCGGGCTGCT GTCCGCCCTC
CTGATCGTCT GCGCCGGCCG GGGGGCGGGC CTGGCCCTGC TCGCCCGCGT CCGCCCGGCG
ACCGTCCCCG TTCCCGCCGG CGCGCGCGGC CTGTCCGAGG TGCCGGCGGG CGCCCAGCCA
TGA
 
Protein sequence
MDAAWKRGRA LRRFAGSITV MTVLGHTVLG FEQAYLTPIA GAVTGMIAEF VLETVEAWAW 
RRPARYRGTP GQVADFFLPS YITGLTCAML LYGGADPMPV VLAVLIGVGS TYVLRVRAPG
VAGHRTGDTP GGHYLNPSCS GALAVVLLFP WVGVAPPYGL AEWVPGPPGS LVPLAGLVLV
LGSAVNAGLV GRLPLVLGWV GGSVLQGLAR GGLTDVSVIG ALLPMTGVAS VLATGYVLTD
LGTTPARPRG QVVFGLATAA AHGLLVQFHF HVVSGLLSAL LIVCAGRGAG LALLARVRPA
TVPVPAGARG LSEVPAGAQP