| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8212 |
|---|
| Symbol | |
|---|
| ID | 8671540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 9057941 |
|---|
| End bp | 9059434 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | sugar ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_003343605 |
|---|
| Protein GI | 271969409 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCTT CCGTTAAAGC TGTTGAAGCG CTTGGTATCA CCAAGCGCTT CGGCCCGACC
ATCGCGCTCA ACGGTGCCGG GATCGCCATC ACCGAGGGGG AGACGCACGC GCTGGTCGGC
CGGAACGGCG CGGGCAAGTC CACGCTGGTG TCGATCCTGA CCGGGCTCCA GCGCCCCGAC
GAGGGCGAGG TCCGCTTCGG CGGGGAGCCC GCGCCGCCGC TGGCCGACCG GGACGCCTGG
CGGCAGCGCG TCGCGTGCGT CTACCAGAAG TCGACGATCA TCCCCACGCT CACCGTCGCG
GAGAACCTCT TCCTGAACCG GCAGACCGAC CGGGGCGCGA TCAGGTGGCG CGGCCTGCGC
GCGCGGGCCA GGCAGCTCCT GGAGCAGTAC GGCGTGGACG TGGACGCCGA CGGCCTCGCC
GGAGACCTGA GCGTCGAGCA GCGCCAGCTT CTGGAGATCG CCCGGGCGCT GTCGTTCGGC
GCCCGGTTCA TCATCCTGGA CGAGCCCACC GCCCAGCTCG ACGGCCCGGC CATCCAGCGG
CTCTTCGACC GGATGCGCTC CCTCCGGGAA CAGGGTGTGA CGATGATGTT CATCTCGCAC
CACCTGGATG AGGTGTACGA GATCTGCCAG AGCGTCTCGG TCTTCCGCGA CGCCCGGCAC
ATCGTCACCA CCACGGTCGG CGACCTCCCG CACGCCCAGC TGGTCGACGC GATGACCGGC
GAGGCCACCG CCGCCTACGA ATACCGCTCC CGTACGGCCG ACGCCTCCGC CCCCGTCGTC
CTGGCCGCCC GGGGGCTCAG CCTCGCCGGC CGCTACGAGG ACGTGGACCT GGCCATCAGG
TCCGGGGAGA TCGTCGGCCT GGCCGGCTCC GGCAGCAGCG GCAAGGTCGG CCTGGCCGAG
ACGCTGGTCG GCCTCCGCCG GGCCGACACC GGCACGGTGA CCGTCAACGG TACCGAGGTC
AAGCCGGGAG ACGTGCCCTC CGTGCTCGCC GCGGGTCTCG GCTTCGTTCC CCAGGACCGG
CACCACCAGG GCTTCGTGCC GCTGCTGTCG ATCGCGGAGA ACGCCACCAT CCCGATCGCG
GGCAAGCTCG GCCGGTACGG AATGATCTCC CCGGCGAGAC GGCGTGAGCG CGGTGCCCGG
ATGATCGCCG AGCTGGACAT CAAGACGACC GGACCCGACC AGCCGGTGGC CGACCTGTCC
GGCGGCAACG CGCAGAAGGT CGTGCTGGCG AGGGCGCTCG CGGACGACCC CCGGGCGCTC
GTGGTCATCA ACCCGACCGC CGGTGTGGAC GTGAAGGCCA AGCACTCGCT CCTCGGCGCC
GTGGAGGACG CGGCGGCCCA GGGGACCGGA GCCGTACTGG TCTCCGACGA ACTCGACGAC
CTGCGGATCT GCGACCGGGT CCTGGTCATG TTTCACGGCA AGGTCGTGAA GGACGTGCCC
CGCGGCTGGA CCGACAGCGA GCTGGTGGCG GCGATGGAAG GTATCGAACA CTGA
|
|---|
| Protein sequence | MTSSVKAVEA LGITKRFGPT IALNGAGIAI TEGETHALVG RNGAGKSTLV SILTGLQRPD
EGEVRFGGEP APPLADRDAW RQRVACVYQK STIIPTLTVA ENLFLNRQTD RGAIRWRGLR
ARARQLLEQY GVDVDADGLA GDLSVEQRQL LEIARALSFG ARFIILDEPT AQLDGPAIQR
LFDRMRSLRE QGVTMMFISH HLDEVYEICQ SVSVFRDARH IVTTTVGDLP HAQLVDAMTG
EATAAYEYRS RTADASAPVV LAARGLSLAG RYEDVDLAIR SGEIVGLAGS GSSGKVGLAE
TLVGLRRADT GTVTVNGTEV KPGDVPSVLA AGLGFVPQDR HHQGFVPLLS IAENATIPIA
GKLGRYGMIS PARRRERGAR MIAELDIKTT GPDQPVADLS GGNAQKVVLA RALADDPRAL
VVINPTAGVD VKAKHSLLGA VEDAAAQGTG AVLVSDELDD LRICDRVLVM FHGKVVKDVP
RGWTDSELVA AMEGIEH
|
|---|
| |