Gene Sros_8200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8200 
Symbol 
ID8671528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9047155 
End bp9047868 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content74% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003343593 
Protein GI271969397 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.53611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACCC CGCATGTGAC CATCGAGGCG CCGGTCGCCT CGCGCCTCCC CGGCCCGCCG 
CCCCCGAGCG CCGCCGGACC GGCCAAGACC AAGGGGGCAC CCGGCGTGCA GAGCGAATCG
GCGTCCACCG GCGTCCGCAC GAGAAGCCAG CACCAGCGGC GCAAGCGCAT CGTCCAGGCG
GCCGCCGCCC TCGCCTCGCG CGGCGGCGTC GAGGCCATGC AGATGCGCAC CGTCGCCGAG
CGTGCGGGAG TCGCCCTCGG CACCCTCTAC CGCTACTTCC CCTCCAAGAT GGATCTGGTC
GTCGCCGTCG TCGGCGAGGA GATCGACCTC CTGGAGAGCA GCATCGAGCG CCGCCCGCCC
GGTGCCACCA CACCCCCGGG CCGCGCCGTC GACGTCCTGA TGCGCGCCAC CCGCGGCCTG
ATGCGCGAGC CCGAGCTCGC CGACGCCCTC ATCCGCTCGC TGATCCTGGC CGAGGTGGAC
ACCCCCTTCG GGGACCGCAT GGCGGGCCTG CTGCTCCGCG TCGCCGGAGA CGGCCTCACC
GCCGAGACCG CCACCGAGGA GCAGTTCGCC CTCGCGGACT CGCTGGCCAG CGTCTGGGTG
CACGAGCTGC TGGAGATGCT CCGCGGCCGC CGCACGTACG AGCAGATCCA GCGCCGCATC
GAGATCGCCG CCACCCGCCT GCTCGTCGAT TTCCAGCCTC CTCCTTCCGC CTGA
 
Protein sequence
MRTPHVTIEA PVASRLPGPP PPSAAGPAKT KGAPGVQSES ASTGVRTRSQ HQRRKRIVQA 
AAALASRGGV EAMQMRTVAE RAGVALGTLY RYFPSKMDLV VAVVGEEIDL LESSIERRPP
GATTPPGRAV DVLMRATRGL MREPELADAL IRSLILAEVD TPFGDRMAGL LLRVAGDGLT
AETATEEQFA LADSLASVWV HELLEMLRGR RTYEQIQRRI EIAATRLLVD FQPPPSA