Gene Sros_8167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8167 
Symbol 
ID8671495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9003661 
End bp9004956 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content73% 
IMG OID 
ProductCu2+-containing amine oxidase-like protein 
Protein accessionYP_003343561 
Protein GI271969365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0769663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCTGC GCCTGATCCT CTCCTGCGCC TTGCTCGCCG GCGTCCTCGG CCCGGCGCAG 
ACCACGCACG CCGCGCACGC CGCCCAGGCC TCCGCCGCGC ACGCCGCCCA GGCCGCGCAC
GTCACACCTG CCATACCCGC CGCGCACGCC GTACGGCTCC CGCACGTCGC GGCTCCCGCG
CGGGCCGTAC GGGTTCCGCA GGGCGCGGTC GCGCAGGCCG TACGGGCTCC GGCGTCGCCG
TGCAGCGCGC CGTACCGGAT CGACAGGACC CTGCCGAACG GCGCGCGCTG GCAGCTCTGC
TGGGAGATGC GCACCATCGA GGGACTGACC CTCACCAAGG TCGTCTACAC GCCGAAGGGC
AACCGCCCGG TCAGCGTGCT GCGCAGCACC GCGCTGGCCC AGATCCACGT GCCCTACGAC
AGCGGCAGCC CCCGCTACCA CGACATCGGG GCCCTGGGCC ACACGGCCAT CCCCCTGCTG
GCCGCCGACT GTCCCGGCGG CGAGCGCCGG GAGCAGTCCG TCTGCGTGAC GACCCGGGCG
CGCGGCCACG CCTATCTGAA GTCCGGCTAC GACGGGCCGA GCACCTCGGC CCAGGGGCAC
GACCTGGTGG TGTTCGCCGC CTTCCAGGTG GGCTGGTACA CCTACCTGGC CGAATGGGCC
TTCTCCGACG ACGGGGCGAT CACCCCCCGG GTGGGCGCGA CCGGCTCACT GGCCGGGTCC
ACCACCACAC CCGGGCACGG CTGGCCGATC GGCGTGGGCA GCGCGACGTT CGAGGAGAGC
CACAGCCACA ACGTCTTCTG GCGCCTCGAC TTCGACATCC AGGGCAAGAG CGGCGACGTC
GTCGAGCAGT ACGACTTCTC CGGGAGCCGT ACGGCCAAGC GGAAGCTCAA GCGCACGACC
CTCACCAGGG AGGCCAAGGC CCTCAACCGC CGGACGCGCT GGTGGCGCGT GGTCGACCGC
GGGGTCCGCA ACGCCGACGG ACACCCCGTC TCCTGGGAGC TCAACAACTC CGACAGCGCG
CAGTATCGCG GCCCGGCCGG CGAGGCCTTC ACCCGCGCCG ACGTCTACGT CACCGACTAC
CGCTCCTGCG AGCGCCTGGC GACCACCAAC CCGGCGCCCA GGTGCGCCGG GTCCGTCGAC
CGCTACGCGA ACGGGGAGAG GCTCACCGAC CCCGTGCTCT GGGTCAACGT CGGCTACCAC
CACGTCCCTC GCGACGAGGA CGCCGATCCC ATGCCGACCC ACTGGCAGGG TTTCCGCATC
ACCCCCCGCG ACGTCACGGC CAAGAACCCC CACTGA
 
Protein sequence
MSLRLILSCA LLAGVLGPAQ TTHAAHAAQA SAAHAAQAAH VTPAIPAAHA VRLPHVAAPA 
RAVRVPQGAV AQAVRAPASP CSAPYRIDRT LPNGARWQLC WEMRTIEGLT LTKVVYTPKG
NRPVSVLRST ALAQIHVPYD SGSPRYHDIG ALGHTAIPLL AADCPGGERR EQSVCVTTRA
RGHAYLKSGY DGPSTSAQGH DLVVFAAFQV GWYTYLAEWA FSDDGAITPR VGATGSLAGS
TTTPGHGWPI GVGSATFEES HSHNVFWRLD FDIQGKSGDV VEQYDFSGSR TAKRKLKRTT
LTREAKALNR RTRWWRVVDR GVRNADGHPV SWELNNSDSA QYRGPAGEAF TRADVYVTDY
RSCERLATTN PAPRCAGSVD RYANGERLTD PVLWVNVGYH HVPRDEDADP MPTHWQGFRI
TPRDVTAKNP H