Gene Sros_8144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8144 
Symbol 
ID8671472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8982997 
End bp8985021 
Gene Length2025 bp 
Protein Length674 aa 
Translation table11 
GC content73% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003343542 
Protein GI271969346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.977782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTTCTG CATATCCCGT TGGTGTGTGT GACACTGGCG ACGCGTATGC GCAGGTCGGC 
ACCGTTGTCA TCATGAAGAC GAGCGTCAGG AAGATCCTCG CCGCGGTGCT CGCCGCGGGT
GCGGTGGCCG GATTCCAGAT GCCGGCGGGG GCCGAGCCGG CGCCTCGACC GCGGATCGAG
CCGCACGACG TCGAGGAGCT GGTCGACCGG ATCGTGCCCG CGCAGCTCGC CGGGGACAGG
ATCCCCGGCG CGGCGGTGGC CGTGGTCGCC GACGGGCGGA CGGTTCTCGC GAAGGGGTAC
GGCGTCGCCG ACGTCACGAC CGGGAGACCG GTGGACGCGA GCCGTACGGG CTTCTTCACC
GGGTCGATGA GCAAGCTGCT CACCACCACC GCCGTCCTGC AACTGGTGGA GCGGGGCAGG
CTCGATCTGC GCGCCGACGT CAACCGCTAC CTCACCGCCT TCAAGATCAA GGACACCTAT
CCCGGGCAGC CCGTCACCGT TGAGCATCTG CTGACCTACA CGGCGGGATT CGACGACGAC
ATCGTCGGGC TCGCCACGAC CGATCCCCGG GCCGTCGCCC CCCTCGGCCG CAGCGTGGCC
GACCGGCAAC CGAGACGGGT GCGCCCGCCG GGCACTCGCG TGGCCTACAA CAACTACGGC
CTGGCGCTGG CCGGCCATCT CGTCGAGATC GCCTCCGGGC AGCCGTTCGC GCACTACGTC
GACCAGCGCG TCCTCAAGCC GCTGGGCATG GACTCCACCA CCGTGGCGGT GCCGCATCCG
GCTGCGATCG ACGCCGCCCT CGCCCGTGGC CACCGTCCCG CCGGGGACGG TCACACCGTC
GAGAAGGCCC TGTACGGCCC GTGGACCCCC ACCGGGACCG GCCCCGCCAC CACCGCCGCC
GACATGGCCC GGTTCATGCT CGCCCAGCTG CGGAACGACC CCCGGCTCGG CCGGAACGTG
GCCCGCCTGA TGCAGCGGCA GCACCACACC CAGGACACCC GCATGCCCGG CATGGGTTAC
ACCTTCGAGC AGCGCCCCCG CAACGGCCGG TGGCTGGTCT ACAAGGACGG CGACGTGCCC
GGCTTCCACA ACGTCATGGC GCTGCTGCCC GACGAGGGCG TCGGGATCTA CGTCGTCTAC
AACGGCGACG GGGTGGACAC CGTGGCCCCC TGGGACGGCA ACGCCCTCGT CAACCAGATC
GTCGACCGCT ATCTCCCCGA CACGGGGCGC CGCACGCACG GCACGGCCGG CGGCGAGGTG
TCCCGGCCCG ACCGCGCGCG GGACGCCGCC GCCGGCGAGG TGTCCGCGTT CGCCGGAACG
TATCGGTCGG CCCGGACCAG CCAGACCAGC CTCTTGAAGG TCGCCGCGCT GTCGGCGGCA
CCGACCGTGT CGGCCAACGC CGACGGCACC CTGACGACCA CCGGGCTGTC GCCGGACCCC
GCCAGGCGGA CCCAGCACTG GATCCGGATC CAGGCCGGCC TCTTCGCGGA ACGCGACGGC
CAGGACCGGA TCGCCTTCGA CGGCAAGGGG GTGCTGAGCA CCTCGGCGAA CCCGGCGGAG
ACCCTTGAGA AGCTCGCCTG GTACGACTCC CCGGCACCGC ACCTCGGCCT GCTCGGCGCC
GGGGCACTGG CGCTGGTGCT CGCCTTCCTC GGGTTCCCGC TCCTGGCGGC CGTACGGATC
CTCGGACGGC GCCCCCGGCA CACGCCCGGT GCCCGCGCGG CCCGGTCGCT GGCCTGGATC
ACCGGGGCGC TCGTCACCGC CTTCCTGACC GGGTTCGCCG TCGTCATGGC CGACCCCGCC
ACCGTGCTGC TCGACTCGCC GTGGCCGGCC GCCCTGCAGG TCACCGCGGC CGTGGCCCTC
GTGTCCGCGA TCCTCGTGTC GGCGGCCGCC GTCGCCGCCT GGTGGAAGGG CTGGTGGGGG
TGGGCCGGAC GGCTGTCCTA CACGCTGGTC GCGCTGGGCG GGGCGGGGTT CTTCACCGTC
GCCGTGTCCT ACAACCTCGT CGCCCTGCCG TTCTCCGCCG GCTGA
 
Protein sequence
MCSAYPVGVC DTGDAYAQVG TVVIMKTSVR KILAAVLAAG AVAGFQMPAG AEPAPRPRIE 
PHDVEELVDR IVPAQLAGDR IPGAAVAVVA DGRTVLAKGY GVADVTTGRP VDASRTGFFT
GSMSKLLTTT AVLQLVERGR LDLRADVNRY LTAFKIKDTY PGQPVTVEHL LTYTAGFDDD
IVGLATTDPR AVAPLGRSVA DRQPRRVRPP GTRVAYNNYG LALAGHLVEI ASGQPFAHYV
DQRVLKPLGM DSTTVAVPHP AAIDAALARG HRPAGDGHTV EKALYGPWTP TGTGPATTAA
DMARFMLAQL RNDPRLGRNV ARLMQRQHHT QDTRMPGMGY TFEQRPRNGR WLVYKDGDVP
GFHNVMALLP DEGVGIYVVY NGDGVDTVAP WDGNALVNQI VDRYLPDTGR RTHGTAGGEV
SRPDRARDAA AGEVSAFAGT YRSARTSQTS LLKVAALSAA PTVSANADGT LTTTGLSPDP
ARRTQHWIRI QAGLFAERDG QDRIAFDGKG VLSTSANPAE TLEKLAWYDS PAPHLGLLGA
GALALVLAFL GFPLLAAVRI LGRRPRHTPG ARAARSLAWI TGALVTAFLT GFAVVMADPA
TVLLDSPWPA ALQVTAAVAL VSAILVSAAA VAAWWKGWWG WAGRLSYTLV ALGGAGFFTV
AVSYNLVALP FSAG