Gene Sros_8143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8143 
Symbol 
ID8671471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8980269 
End bp8982716 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003343541 
Protein GI271969345 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.797388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAGCT CTGCCGACGG CAGGAGAGCC GGCCGGGTCG CGGTCGTGCT CGCCCTGCCC 
GTTGCCCTCG GCCTCGGCTC GATCCCCGTT CTCGCCGATC CGTCCCCGCC GCCCGGCGAG
GTCGTGCCCG ACCGGCGGTC CGGCACCGGA CAGAACGGCG TGGCGCTACT GCGCGTCGTC
GTCCCCGGCC AGGACGGCAT CGACAGGCTC AACGCCCTGG GAGTCGACCT CGCGGAGTAC
AGGAAACCCG TCGACGGCGG TTTCGAGGTA CACGCCGTAC TGAGCCCTCA GGAGGCTCAG
GGGCTGCGCG ATCGGGGATT CGACGTACGC GGCGCCCTCT CGGACCAGGC CGACCACGCC
GAGAACACGG CCGACCGGCA GGCCGCGCTC GCTTCGGCGG CGGAAGCGGC GGCGGAGGCC
GACACGCTGA TCCCGCTCCG CGCCGAGTGG TTCACCAGCC GCGGCGACCG GCGTTTCCTG
TCGGTGGAGG TGAAGTCGAG CGCCACCGAC GCGCAGACGG TGCTCGCCGT CACCTGGGAC
AGCGGCAAGA GGACGCCTCC CGGCTCCGGT GGCACCGCGA CGATGTCGCG CTTCACCGAC
GCGGGCCAGT ACCTGTACCA CCGGTTCAAC TCGCCGCTGT CCGTCGCCGA GATTCCCGCC
AGGGTCACGG TCACCAGCAG CCGGGGCGGC TCGGTCACGG TCCCGGTGGC CAGGTGGCTG
GGGGACAGGC GCAAGGCACC CGGCAGGCAC TACGTCGCGG ACTTCGTCGA CCACTACATG
GACCCGACCG AGGTGACCGA CCGGATCACC ACGCTGGCCG GGGAGTTTCC GAAGATCTCG
CAGATCGTCG ATCTGCCGTA CCGGACGAAC GGCTACCGCC GGGCGGCGCA GGCGCAGTTC
GGCAGCGTCG CGGCGAGCAC GTTCTACGTG AGCTCGAAGG CGTACGGACA CGAGGGCGGC
AACGACATCA GCGTGGCCCT GGTGAGGCCC GATGCCGCCT CCGCCCCGAT CGGCGTCTCG
GTCACCGGCA AGGACATCGT GGTCAACCTC GCCACGGACG GGGCCGGCGC GATCAGCAGC
ACCGCCCGGC AGGTGGTCGA CGCGCTCGGC GCCGACGCGG AGGCATCGGC GCTGCTGACC
GCCGGCACCT ATCGGGGCGA CGCCGGTGGC GGCACGGTCG CCGCGGCGCC GGCGACGAGG
CTGACCGACA GCCTGAAGGC GCCGTCAAGC GTCTCGCGTG ACCCGTTCCA GATGAAGGCG
CTGCGTATCG GGAAGAAACG GGACGGCTCG AAGACCGGCG TGTTCCTCTA CTGCCAGGAG
CACGCCCGCG AGTGGGTGAC CCCGCTGGTC TGCGTGGAGA CCGCCGAGCG GCTCCTGCGC
AACTACGCCC GCCACGGGCG GACCAGGAAG CTGGTCGACG ACCTCGACAT CTTCATCGTG
CCGACGGTCA ACCCGGACGG CGCGCACTAC AGCATGTACG ACTACAACTT CCAACGTCGC
AACATGACCA ACCACTGCGC GGCCGGCGCG GCGGACCCGG CGCAGCGCAA CTCCTGGGGC
GTGGACCTGA ACCGCAACTT CTCGGTCGGC TCCGTATTCG ACGGATACAG CGGCGCCTCG
ACGGACTGCA CCGGTGACAC CTTCGCCGGT CCGAGGGAAC TGTCCGAACC GGAGGCGCGC
AACGAGGTCT GGCTGACCCG GCGCCACCCG AACATCAAGT TCGCGATGAA CACCCACGCT
TACGGCGGCT ACTTCATGTG GCCTCCAGGC GCGTACAGAC CGGCCGGACG CGAGCTGCTG
CCACGGGTCG ACCTCGGCAT GGAGAACTTC TTCTGGGAGG CCTCCGGCCA CATCCTCTCC
GCGGTCCAGT CCTGGCGCGG TACGGCGATC TGGCCGGGTC GCACCGGTGC GGTGCCGGAC
GTGCTGTACT CCGCGGCCGG CAACAGCTCC GACGAGCACT GGTTCAACCG CGGAGTCATC
GGCTGGGACT TCGAGGTCGG CGCGGACGTC TACGACCCGG CGACCAAGCA GTTCCAGGCG
GTCGGCTTCC AGCCGGGGTT CGCCGAGGGG CACGAGGAGG CGATGGAGTT CGCCGGCGGC
CAGATCGGCA TCCTGGAGGT CGCCCGGTCC TTCGCCGACG ACGGGGACCG TCCCGGGTCG
GATCTGAAGG TGACCGGCCG GACCGGCACC TCGGCCACGT TCACGTTCGA GACCGACGAG
CCCGCCAACG TCTACTACAC GCTGGACGGC AGCCGTCCGA CGCTGAGCTC GCCCAAGCTC
GCGGCCGCGG GGATACGTGA GGGAGCACAG CGGATCACGG TCGGCAGGAC CACCGAGGTG
CGCTGGTTCG CCGTGGACAT CGCCGGCAAT GTCGAGAAGG ACTACAGGCC GGACGGCGGG
AGCGACGACT ACCGCAAGGA GAGGGTGGAG GTCCGCGACC CCCGCTGA
 
Protein sequence
MRSSADGRRA GRVAVVLALP VALGLGSIPV LADPSPPPGE VVPDRRSGTG QNGVALLRVV 
VPGQDGIDRL NALGVDLAEY RKPVDGGFEV HAVLSPQEAQ GLRDRGFDVR GALSDQADHA
ENTADRQAAL ASAAEAAAEA DTLIPLRAEW FTSRGDRRFL SVEVKSSATD AQTVLAVTWD
SGKRTPPGSG GTATMSRFTD AGQYLYHRFN SPLSVAEIPA RVTVTSSRGG SVTVPVARWL
GDRRKAPGRH YVADFVDHYM DPTEVTDRIT TLAGEFPKIS QIVDLPYRTN GYRRAAQAQF
GSVAASTFYV SSKAYGHEGG NDISVALVRP DAASAPIGVS VTGKDIVVNL ATDGAGAISS
TARQVVDALG ADAEASALLT AGTYRGDAGG GTVAAAPATR LTDSLKAPSS VSRDPFQMKA
LRIGKKRDGS KTGVFLYCQE HAREWVTPLV CVETAERLLR NYARHGRTRK LVDDLDIFIV
PTVNPDGAHY SMYDYNFQRR NMTNHCAAGA ADPAQRNSWG VDLNRNFSVG SVFDGYSGAS
TDCTGDTFAG PRELSEPEAR NEVWLTRRHP NIKFAMNTHA YGGYFMWPPG AYRPAGRELL
PRVDLGMENF FWEASGHILS AVQSWRGTAI WPGRTGAVPD VLYSAAGNSS DEHWFNRGVI
GWDFEVGADV YDPATKQFQA VGFQPGFAEG HEEAMEFAGG QIGILEVARS FADDGDRPGS
DLKVTGRTGT SATFTFETDE PANVYYTLDG SRPTLSSPKL AAAGIREGAQ RITVGRTTEV
RWFAVDIAGN VEKDYRPDGG SDDYRKERVE VRDPR