Gene Sros_8142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8142 
Symbol 
ID8671470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8978893 
End bp8980206 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content72% 
IMG OID 
Producttrehalose synthase 
Protein accessionYP_003343540 
Protein GI271969344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.456805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGACGG AGCTCCTTAC CGGCTGGATA ACCCATCAAC GATGGTTCGC CGGTAAGGGG 
CGGCCGATAG ACGAGCTCGG CGTCGATTCC GACGTCGAGC TCTCCCCCGG CCTGCACCAT
CTGATCATCT CGGTGCGCCA GGGCGGGGCA CACGACCGCT ACCAGCTCCT GCTCGGCACC
GACGGGGACG CCTCCGGGCG CTACAGCCAC GCCCGGATCG GCGACGGCTA CTACGACGCC
GCCTACGACC CCGACCTCAC CGGCACCCTG CTCGCGGGGA TGGCCGGGGA CCGCGACCTC
GGCCCGCTCC GCTTCCGCCA CCTGGAGGGG GTGGAGATCG ACACCTCCCT GCGGAGCCTC
GTGCTCGGCG CGGAGCAGTC CAACACCTCC CTGGTGTACG GCGAGACCTA CATCTGCAAG
CTGTTCCGCC GCCTGATCCC CGGCGTCAAC CCCGAGCTGG AGATCGTCAC CGCCCTGGCC
CGGCACGGCG CCGGCCACAT CGCGCAGCCG TACGGCTGGA TCGAGACCGA CCTCGACGGC
GAGCCCACCA CCCTGGCGAT GACCCAGGAG TTCCTCGCCA CCGCCAACGA CGGCTGGGCC
CTGGCCCTGG CCAGCGTCCG CGACCTGTAC GCCTGCCTGG ACTCCTCGGC CTCCGACGCG
GGCGGCGACT TCAGCTCCGA GGCCTACCGG CTCGGCGTGG CCACCGCCGA GGTCCACCGC
GAGCTGGCCG CCGCGTTCCC CACCGACGTG ATGGAGTCGC AGGAGGTCAA GCAGATGGTC
GAGGACCATC GCCGCCGCCT GGCCGGTGTG ATCGAGGAGG TGCCGCAGCT CGGCCGGTAC
GCGCGGGTGG CCGAGGAGGC CTACCAGCGG GTCGCCGACG TGGTCTCCGA GATCCCCGTG
CAGCGCGTCC ACGGCGACTA CCACCTCGGC CAGGTGATGC GCACGACCAC CGACTGGGTC
GTCCTCGACT TCGAGGGCGA GCCCGGCCAG CCCCTCGCCG AGCGCCGCGC GCTGTCCTCC
CCGCTGCGGG ACGTGGCCGG CATGCTCCGC TCGTTCGACT ACGCCGCCCG CCACCTGCTG
GCCGACCATC CCGACGCCGA TGAGCTGCGC CCCCGGGCCG TCGAATGGGC CGAGCTCAAC
CGCTCGTCCT TCCTGGCCGG CTACTCCGCC GGCGGCGGCC GCCTGCACGC CGAGGACGCC
ATACTGCTCC GCGCCCTGGA GCTGGTCAAG GCCGTCTACG AGGTCGGCTA CGAGGCCCGC
AACCGCCCCT CCTGGCTCCC CATCCCCATG GCCGCCTTCC AGGTCGAACG GTAG
 
Protein sequence
MLTELLTGWI THQRWFAGKG RPIDELGVDS DVELSPGLHH LIISVRQGGA HDRYQLLLGT 
DGDASGRYSH ARIGDGYYDA AYDPDLTGTL LAGMAGDRDL GPLRFRHLEG VEIDTSLRSL
VLGAEQSNTS LVYGETYICK LFRRLIPGVN PELEIVTALA RHGAGHIAQP YGWIETDLDG
EPTTLAMTQE FLATANDGWA LALASVRDLY ACLDSSASDA GGDFSSEAYR LGVATAEVHR
ELAAAFPTDV MESQEVKQMV EDHRRRLAGV IEEVPQLGRY ARVAEEAYQR VADVVSEIPV
QRVHGDYHLG QVMRTTTDWV VLDFEGEPGQ PLAERRALSS PLRDVAGMLR SFDYAARHLL
ADHPDADELR PRAVEWAELN RSSFLAGYSA GGGRLHAEDA ILLRALELVK AVYEVGYEAR
NRPSWLPIPM AAFQVER