| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8140 |
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| Symbol | |
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| ID | 8671468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | + |
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| Start bp | 8974953 |
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| End bp | 8977139 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003343538 |
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| Protein GI | 271969342 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.509031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGAC GAATCCCAAT CCAGGACATC CACCCCACGG TCGACTGCGG GCGCTACCCC
GCCAAGGCCG CTGCGGGCGA GACCTTCGAG ATCGCCGCCA CCGTGTTCCG GGAGGGACAC
GACGCGGTGG CCGCCGGAGC CGTGCTCACC GGCCCGGACG GCGTGCGCGG CCCGCTGCTG
CGCATGAGAG AGCTGGCTCC GGGCACCGAC CGCTGGGGCG TCGAGGTGAC GCTGCCCACC
GAGGGCGACT GGCACTTCCG CGTCGAGGCG TGGAGTGATC CCATGGCCAC CTGGCTCCAC
GACGCGGGCA TCAAGATCCC GCGTGACATG GACGCCGAAC TCATGTGCGA GGAGGGCGCC
CGGCTCTTCG AACGCGCGGC CAGAGCCGTA CGGCCCGCGG ACTGCGGCGG CCTGAGCCGC
AGGCCCGCGG CCGTGAAGGC GCCCGACGGC AAGGCGGCGG GCGGCAAGGC GGCGGGCGGC
AAGGCGGCGG GCGGCAAGGC GGCGGGCAAG GCCGCCGGTA CGGCCCCGGC CGGTTCCGCG
GGACGGGAGG CCGTCGTGGA GGCCCAGGCG TGCGGGCACC GGGCCGCGCT GCTGTCGGTG
GCGGCCAAGC TGCGCGACCA GGAGCTCGAC CCGCGCGCCC GGTTCTCCCT GGCCCAGCTC
CCCGAGACCG CCGAGCTGCT GCGCGCCCAC CCGCTCCGGG ATCTGGTGAC CAGGTCGCCC
AGGCGCGTGG TCAGGGTCGA CCGGCGCAGG GCGCTGTTCG GCTCCTGGTA CGAGTTCTTC
CCCCGTTCCG AGGGCGCGAT CGTCGAACGG GACACCGCCC CCAAGTCCGG AAATTTCACG
ACCTCTGCGA AGCGGCTGCC CGCCGTCGCG AAAATGGGTT TCGACGTCGT GTACCTGCCG
CCGATCCACC CGATCGGCCA CAGCTTCCGC AAGGGCCGCA ACAACACCCT GACGCCCGAG
CCGTACGACC CCGGCTCCCC CTGGGCAATC GGCTCCGAGG AGGGCGGACA CGACGCCATC
CACCCCGACC TCGGCACCTT CGAGGACTTC GACGCCTTCG TGGCCAAGAC CCGCGAGCTC
GGCATGGAGG TCGCCCTCGA TCTGGCCCTG CAGTGCGCGC CCGACCACCC GTGGGTCAGG
GAGCACCCGG AGTGGTTCAA CATCCGCGCC GACGGCTCGA TCGCCTACGC GGAGAACCCC
CCGAAGAAGT ACCAGGACAT CTACCCGCTG AACTTCGACA AGGATCCCGA GGGCATCTAC
GCCGAGGTCA AGCGGGTGGT GCGGCTCTGG ATGGACCACG GCGTGCGGAT CTTCCGGGTG
GACAACCCGC ACACCAAGCC GGTGGCGTTC TGGGAGCGGC TGCTGGCCGA CATCAACTCC
ACCGACCCGG ACGTGCTGTT CCTGGCGGAG GCGTTCACCC GCCCGGCGAT GATGCAGGCG
CTGGCCAAGG TCGGCTTCCA CCAGTCCTAC ACCTACTTCA CGTGGAAGAA CTCCCGGCCG
GAGGTCGAGG CCTACCTGAG CGAGCTCTCC CACGAGACGT CACACTTCCT GCGGCCGAAC
GTGTTCGTCA ACACTCCGGA CATTCTCCAT GAATACCTGC AACACGGGGG AGTCCCGGCA
TTTTATATCA GAGCTATCCT CGCGGCGACG GCGATGCCGA CCTGGGGGGT ATACGCCGGA
TATGAACTTG CGGAGAATGT CCCGGTTCGG CCGGGGAGCG AAGAATACCT AGATAGTGAG
AAATATCAGT ATAAACCGCG CGATTGGGTA GCGGCTGAGC GGGAAGGCCG TAGCCTCGCG
CCCTTCATCA CGCAACTTAA TTTGTTCCGA AGAGCACACC CGGCGCTCCA GGAACTGCGT
AACCTACGGT TCCATAGCGT CGACCATCCG GACGTGGTCT GCTTCTCCAA GCGGCTGCCC
GGCGCCTACG ACACGGCCAC ACGACGGCAC GGCCTGGGCG ATGTGGTGCT GACGGTCGTG
AATCTCGATC CACACAACAC CCATGAGGCG ACGGTGTCCC TGGACATGCC GTCTCTGGGT
CTCGACTGGC ATGCCGAGTT CTTCGTCGAC GACGAGCTGT CAGGCGAGTC GTATCGCTGG
CGACAGAACA ACTACGTGCG CCTCGATCCC CATATCCACC CAGCACACAT CTTCACTTTG
CGTGCCGCGA CGGCGAACCA GCGGTGA
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| Protein sequence | MIGRIPIQDI HPTVDCGRYP AKAAAGETFE IAATVFREGH DAVAAGAVLT GPDGVRGPLL
RMRELAPGTD RWGVEVTLPT EGDWHFRVEA WSDPMATWLH DAGIKIPRDM DAELMCEEGA
RLFERAARAV RPADCGGLSR RPAAVKAPDG KAAGGKAAGG KAAGGKAAGK AAGTAPAGSA
GREAVVEAQA CGHRAALLSV AAKLRDQELD PRARFSLAQL PETAELLRAH PLRDLVTRSP
RRVVRVDRRR ALFGSWYEFF PRSEGAIVER DTAPKSGNFT TSAKRLPAVA KMGFDVVYLP
PIHPIGHSFR KGRNNTLTPE PYDPGSPWAI GSEEGGHDAI HPDLGTFEDF DAFVAKTREL
GMEVALDLAL QCAPDHPWVR EHPEWFNIRA DGSIAYAENP PKKYQDIYPL NFDKDPEGIY
AEVKRVVRLW MDHGVRIFRV DNPHTKPVAF WERLLADINS TDPDVLFLAE AFTRPAMMQA
LAKVGFHQSY TYFTWKNSRP EVEAYLSELS HETSHFLRPN VFVNTPDILH EYLQHGGVPA
FYIRAILAAT AMPTWGVYAG YELAENVPVR PGSEEYLDSE KYQYKPRDWV AAEREGRSLA
PFITQLNLFR RAHPALQELR NLRFHSVDHP DVVCFSKRLP GAYDTATRRH GLGDVVLTVV
NLDPHNTHEA TVSLDMPSLG LDWHAEFFVD DELSGESYRW RQNNYVRLDP HIHPAHIFTL
RAATANQR
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