Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8127 |
Symbol | |
ID | 8671455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 8957252 |
End bp | 8959372 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | glycogen debranching protein |
Protein accession | YP_003343525 |
Protein GI | 271969329 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.196485 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGGAT GGACGTTCGA AGGCCAGCCC GGAGCACTGG GCGACACCAC GGTGACCCTG GTGGAGGGCG GGTCCTTCTG CGTGTGCGCG CGCGGTGGCG ACATCGTGCC AGGAGGGGCG CAGGGCGTCT ACCATGCCGA CACCCGGCTG CTGTCGCGCT GGGAGCTGAG GGTGGACGAC GCGCCGGTGG AGGCTCTCCG GGTGCTCACG GGCGAGCCGT ACCACGCGAC GTTCGTCGGC CGGGCGGGGC CGCGGCCGGG GCGGGCGGAG AGCAGCCTGC TGGTGATCAG GGACCGCTAC GTCGGGGGCG GCCTCCGCGA GGACCTGACC CTGCGCAACC TGTCCGACGA ACCGGCCGGA TGCGTGGTCG ACATCCACGT CAGCTCGGAC GTGGCCGACC TGTTCGAGGT GAAGGCCGGC CGGGTCCGCT ACGTGCCCGA CGTGGAGATG ACCCCCGACA GGTCGGGCCT GCTGGTCTTC TCCGCCAGCC GCTCGCGCGG CGCCCGGGTG GTGGGCGAGC CCACGCCGTT CGCCGTACCG GGCATGCTCA TCTTCCGGGT CGTCGTGCCC GCGCGCGGCG AATGGACCGT CAGCCTGCAG GTCAACCCGA TCCTGGAGGG GGAGGAGTCG CCCGCCTGGT TCTCCACCCA CCACCCGGTG GAGCACGCCG AACCCGCCAG GCGCCGCGCC GACTGGGCGC GCCTCAGCCC CAGCCTCAGC ACTCCCGACC GCACCCTCTC CCAGGTCCTG CACCGCTCCA GGGAGGACCT CGGGGCGCTG CGGCTGTTCG AGCCCGACAG ACCCGACGAA CCACCCAGCA TCGCCGCGGG CGCGCCGTGG TTCATGACCC TGTTCGGCCG CGACTCGCTG CTGACCTCGT GGATGGCGCT GCCGCTGGAC CAGACCCTGG CGCTCGGCAC CGTCCGCCGC CTGGCCCGGC TGCAGGGCAG GATCGACGAC CCGCTCACCG AGGAGGAGCC CGGGAAGATC CTGCACGAGC TCCGCTTCGG CGTGCAGACC GGCGCCTCGC CGCACGGCGG CCTCGCCTAC TACGGCTCGG TCGACTCCAC CCCGCTGTTC GTGATGCTCC TGGGCGAGCT GCGCCGGTGG GGAGTGCACG GGGAGGCGGT CGAGGAGCTG ATGCCGAACG TCGACGACGC CCTCGCCTGG ATAACCCGGT CGGCCGACCC GTTCCTGTTC TACCGCCGCA AGACCGACCA CGGCCTGGTC AACCAGGGCT GGAAGGACTC CTTCGACGGC GTCAACTTCG CCGACGGCGC GCTGGCCCGC CCGCCCATCG CGCTGGCCGA GGTCCAGGGA TACGTCTACG CCGCCTACAC CGCGCGCGCC CACTTCGCCC ACGAGGCCGG TGACCAGGGG CTGGAGGAGC ACTGGGCCGA CCAGGCGACG CGGATCCGGG AGGCGTTCAA CGAGCGCTTC TGGCTGTCCG ACCGGGGGTA CTACGCCATC GGCCTCGACG GCAGGGGACG CCCCATCGAC AGCCTCGCCT CCAACATGGG GCACTGCCTG TGGACCGGCA TCGTCGACGA GGACAAGGCC GAGGCCGTCG CCGCGCACCT GCTCTCACCG GAGATGTTCA CCGGGTACGG CGTGCGCACC CTGGCCTCCG GCATGGGTGC CTACAACCCG ATGAGCTACC ACAACGGCTC GGTCTGGCCG CACGACAACG CCATCATCGC CGCCGGTCTG ATGCGCTACG GCTTCACGGA GGAGGCGCGG CGCATCGCGT TCGGCCTGCT GGAGGCGGCC GAGGTCTTCG GCTGGCGGCT GCCGGAGCTG TTCTGCGGGT TCGGCAGGGA CGAGTTCGCC TGGCCGGTGC CCTATCCCAC CTCCTGCTCC CCGCAGGCCT GGGCCGCCGC GACCCCCATC CAGCTCGTCC GCTCCCTGCT CCGCTTCGAC CCGTGGGTCC CGCGCGGCCA GATCTGGGTG GCTCCCGTCG GGCTGGACAA CCTGCGGATC ACCGGGATCC CGATCGCCGG GGCCCGGATC GACCTTGAGG TCGCCGACGG CGGCGTCTCC GTCACCGGGG TGCCCGAGGG GATCACCGTG CACTCCGAAC CACGCCATCC CATGAGGGCG GCCCTCCACC GGGTCTCCTG A
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Protein sequence | MDGWTFEGQP GALGDTTVTL VEGGSFCVCA RGGDIVPGGA QGVYHADTRL LSRWELRVDD APVEALRVLT GEPYHATFVG RAGPRPGRAE SSLLVIRDRY VGGGLREDLT LRNLSDEPAG CVVDIHVSSD VADLFEVKAG RVRYVPDVEM TPDRSGLLVF SASRSRGARV VGEPTPFAVP GMLIFRVVVP ARGEWTVSLQ VNPILEGEES PAWFSTHHPV EHAEPARRRA DWARLSPSLS TPDRTLSQVL HRSREDLGAL RLFEPDRPDE PPSIAAGAPW FMTLFGRDSL LTSWMALPLD QTLALGTVRR LARLQGRIDD PLTEEEPGKI LHELRFGVQT GASPHGGLAY YGSVDSTPLF VMLLGELRRW GVHGEAVEEL MPNVDDALAW ITRSADPFLF YRRKTDHGLV NQGWKDSFDG VNFADGALAR PPIALAEVQG YVYAAYTARA HFAHEAGDQG LEEHWADQAT RIREAFNERF WLSDRGYYAI GLDGRGRPID SLASNMGHCL WTGIVDEDKA EAVAAHLLSP EMFTGYGVRT LASGMGAYNP MSYHNGSVWP HDNAIIAAGL MRYGFTEEAR RIAFGLLEAA EVFGWRLPEL FCGFGRDEFA WPVPYPTSCS PQAWAAATPI QLVRSLLRFD PWVPRGQIWV APVGLDNLRI TGIPIAGARI DLEVADGGVS VTGVPEGITV HSEPRHPMRA ALHRVS
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