Gene Sros_8127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8127 
Symbol 
ID8671455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8957252 
End bp8959372 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content72% 
IMG OID 
Productglycogen debranching protein 
Protein accessionYP_003343525 
Protein GI271969329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.196485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGGAT GGACGTTCGA AGGCCAGCCC GGAGCACTGG GCGACACCAC GGTGACCCTG 
GTGGAGGGCG GGTCCTTCTG CGTGTGCGCG CGCGGTGGCG ACATCGTGCC AGGAGGGGCG
CAGGGCGTCT ACCATGCCGA CACCCGGCTG CTGTCGCGCT GGGAGCTGAG GGTGGACGAC
GCGCCGGTGG AGGCTCTCCG GGTGCTCACG GGCGAGCCGT ACCACGCGAC GTTCGTCGGC
CGGGCGGGGC CGCGGCCGGG GCGGGCGGAG AGCAGCCTGC TGGTGATCAG GGACCGCTAC
GTCGGGGGCG GCCTCCGCGA GGACCTGACC CTGCGCAACC TGTCCGACGA ACCGGCCGGA
TGCGTGGTCG ACATCCACGT CAGCTCGGAC GTGGCCGACC TGTTCGAGGT GAAGGCCGGC
CGGGTCCGCT ACGTGCCCGA CGTGGAGATG ACCCCCGACA GGTCGGGCCT GCTGGTCTTC
TCCGCCAGCC GCTCGCGCGG CGCCCGGGTG GTGGGCGAGC CCACGCCGTT CGCCGTACCG
GGCATGCTCA TCTTCCGGGT CGTCGTGCCC GCGCGCGGCG AATGGACCGT CAGCCTGCAG
GTCAACCCGA TCCTGGAGGG GGAGGAGTCG CCCGCCTGGT TCTCCACCCA CCACCCGGTG
GAGCACGCCG AACCCGCCAG GCGCCGCGCC GACTGGGCGC GCCTCAGCCC CAGCCTCAGC
ACTCCCGACC GCACCCTCTC CCAGGTCCTG CACCGCTCCA GGGAGGACCT CGGGGCGCTG
CGGCTGTTCG AGCCCGACAG ACCCGACGAA CCACCCAGCA TCGCCGCGGG CGCGCCGTGG
TTCATGACCC TGTTCGGCCG CGACTCGCTG CTGACCTCGT GGATGGCGCT GCCGCTGGAC
CAGACCCTGG CGCTCGGCAC CGTCCGCCGC CTGGCCCGGC TGCAGGGCAG GATCGACGAC
CCGCTCACCG AGGAGGAGCC CGGGAAGATC CTGCACGAGC TCCGCTTCGG CGTGCAGACC
GGCGCCTCGC CGCACGGCGG CCTCGCCTAC TACGGCTCGG TCGACTCCAC CCCGCTGTTC
GTGATGCTCC TGGGCGAGCT GCGCCGGTGG GGAGTGCACG GGGAGGCGGT CGAGGAGCTG
ATGCCGAACG TCGACGACGC CCTCGCCTGG ATAACCCGGT CGGCCGACCC GTTCCTGTTC
TACCGCCGCA AGACCGACCA CGGCCTGGTC AACCAGGGCT GGAAGGACTC CTTCGACGGC
GTCAACTTCG CCGACGGCGC GCTGGCCCGC CCGCCCATCG CGCTGGCCGA GGTCCAGGGA
TACGTCTACG CCGCCTACAC CGCGCGCGCC CACTTCGCCC ACGAGGCCGG TGACCAGGGG
CTGGAGGAGC ACTGGGCCGA CCAGGCGACG CGGATCCGGG AGGCGTTCAA CGAGCGCTTC
TGGCTGTCCG ACCGGGGGTA CTACGCCATC GGCCTCGACG GCAGGGGACG CCCCATCGAC
AGCCTCGCCT CCAACATGGG GCACTGCCTG TGGACCGGCA TCGTCGACGA GGACAAGGCC
GAGGCCGTCG CCGCGCACCT GCTCTCACCG GAGATGTTCA CCGGGTACGG CGTGCGCACC
CTGGCCTCCG GCATGGGTGC CTACAACCCG ATGAGCTACC ACAACGGCTC GGTCTGGCCG
CACGACAACG CCATCATCGC CGCCGGTCTG ATGCGCTACG GCTTCACGGA GGAGGCGCGG
CGCATCGCGT TCGGCCTGCT GGAGGCGGCC GAGGTCTTCG GCTGGCGGCT GCCGGAGCTG
TTCTGCGGGT TCGGCAGGGA CGAGTTCGCC TGGCCGGTGC CCTATCCCAC CTCCTGCTCC
CCGCAGGCCT GGGCCGCCGC GACCCCCATC CAGCTCGTCC GCTCCCTGCT CCGCTTCGAC
CCGTGGGTCC CGCGCGGCCA GATCTGGGTG GCTCCCGTCG GGCTGGACAA CCTGCGGATC
ACCGGGATCC CGATCGCCGG GGCCCGGATC GACCTTGAGG TCGCCGACGG CGGCGTCTCC
GTCACCGGGG TGCCCGAGGG GATCACCGTG CACTCCGAAC CACGCCATCC CATGAGGGCG
GCCCTCCACC GGGTCTCCTG A
 
Protein sequence
MDGWTFEGQP GALGDTTVTL VEGGSFCVCA RGGDIVPGGA QGVYHADTRL LSRWELRVDD 
APVEALRVLT GEPYHATFVG RAGPRPGRAE SSLLVIRDRY VGGGLREDLT LRNLSDEPAG
CVVDIHVSSD VADLFEVKAG RVRYVPDVEM TPDRSGLLVF SASRSRGARV VGEPTPFAVP
GMLIFRVVVP ARGEWTVSLQ VNPILEGEES PAWFSTHHPV EHAEPARRRA DWARLSPSLS
TPDRTLSQVL HRSREDLGAL RLFEPDRPDE PPSIAAGAPW FMTLFGRDSL LTSWMALPLD
QTLALGTVRR LARLQGRIDD PLTEEEPGKI LHELRFGVQT GASPHGGLAY YGSVDSTPLF
VMLLGELRRW GVHGEAVEEL MPNVDDALAW ITRSADPFLF YRRKTDHGLV NQGWKDSFDG
VNFADGALAR PPIALAEVQG YVYAAYTARA HFAHEAGDQG LEEHWADQAT RIREAFNERF
WLSDRGYYAI GLDGRGRPID SLASNMGHCL WTGIVDEDKA EAVAAHLLSP EMFTGYGVRT
LASGMGAYNP MSYHNGSVWP HDNAIIAAGL MRYGFTEEAR RIAFGLLEAA EVFGWRLPEL
FCGFGRDEFA WPVPYPTSCS PQAWAAATPI QLVRSLLRFD PWVPRGQIWV APVGLDNLRI
TGIPIAGARI DLEVADGGVS VTGVPEGITV HSEPRHPMRA ALHRVS