Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8108 |
Symbol | |
ID | 8671436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 8933593 |
End bp | 8934663 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | tRNA(5-methylaminomethyl-2-thiouridylate)- methyl transferase |
Protein accession | YP_003343506 |
Protein GI | 271969310 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.95515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTTC GTGTGCTTGC CGCCATGTCC GGCGGCGTCG ACTCCGCCGT GGCGGCCGCC CGTATCGCCG AGGCAGGCCA TGACGTCACC GGCGTGCATC TGGCGCTCTC GGCCAACCCT CAGTCGTACC GGACCGGCGC CCGCGGGTGC TGCACGATCG AGGACTCGCG AGACGCCCGC AGGGCCGCCG ACGTGATCGG CATCCCCTTC TACATCTGGG ACATGGCCGA GCGGTTCCAC CGCGACGTGG TCGAGGACTT CGTCAGCGAA TACGCCGCGG GCCGTACGCC CAACCCCTGC CTGCGCTGCA ACGAGAAGAT CAAGTTCGAG GCGGTCCTCG ACCGGGCCCT CGCGCTGGGC TTCGACGCGG TGGCCACCGG GCACCACGCG CGGATCGCCG ACGGCGTGCT GAGCCGCAGC CCCGACGAGG GCAAGGACCA GTCCTACGTG CTCGGCGTGC TCACCAGGGA GCAGCTCAAG CACGCGATCT TCCCGCTGGG CGACTCCACC AAGGCCCAGG TCCGCGAGGA GGCCGCGCGG CGCGGGCTCA TGGTGGCCGA CAAGCCCGAC AGCCACGACA TCTGCTTCAT CGCCGACGGC GACACCCGGG GTTTCCTCGC CGACCGCCTC GGCGCGGAGC AGGGCCCGAT CGTCGACGAG TCCGGTGCGG TCGTCGGCAG GCACGAGGGC GCGTACGGCT TCACCGTCGG CCAGCGCAAG GGCCTGCACA TCGACCGTCC GGCCCCCGAC GGCCGCCCGC GCTACGTGCT GTCCATCGAG CCCGTCTCCA ACACGGTCAC GGTCGGCCCC CGCTCGGCCC TGGAGGTCAC GGGCATCGTG GCCACCCGGC CGGTCTGGAA CGGCCCGGCG GACGTGCCGC ACGAGCCGCT GACCTGCACC GTCCAGCTCC GCGCCCACGG CGAGGTGTAC GGCTGCCGCG CCCAGCTCTC CGGCGACGAG GTCCACATCG CGCTGGACAC CCCCGCCACC GGCGTCGCCG CCGGCCAGGC GGCCGTGCTC TACCTGGGCG ACACCGTGAT CGGATCGGCC ACGATCGCCA CGGCGGCGTA A
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Protein sequence | MRLRVLAAMS GGVDSAVAAA RIAEAGHDVT GVHLALSANP QSYRTGARGC CTIEDSRDAR RAADVIGIPF YIWDMAERFH RDVVEDFVSE YAAGRTPNPC LRCNEKIKFE AVLDRALALG FDAVATGHHA RIADGVLSRS PDEGKDQSYV LGVLTREQLK HAIFPLGDST KAQVREEAAR RGLMVADKPD SHDICFIADG DTRGFLADRL GAEQGPIVDE SGAVVGRHEG AYGFTVGQRK GLHIDRPAPD GRPRYVLSIE PVSNTVTVGP RSALEVTGIV ATRPVWNGPA DVPHEPLTCT VQLRAHGEVY GCRAQLSGDE VHIALDTPAT GVAAGQAAVL YLGDTVIGSA TIATAA
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