Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8100 |
Symbol | |
ID | 8671428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 8923340 |
End bp | 8924785 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003343498 |
Protein GI | 271969302 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.412673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGGTCGC TGGCTCAACC GCCCGCTCAG GGGCCGATCA CACAGGGCGC GCTGGCCCAG TTCGCCGCGC CGCTGCCGAC GTTGTGCCAC GTCACGATCG TGGCCCCCCG CAGGAAGGCC GACCTGGCGC TGCCCGCGGA CATTCCACTG CCCCATGTCC TGCCCGGCCT GCTGCGCGCG GTGGGGGAGA TCGGCGGTGA CGCGTCGGCC GGTCCCGGTT GGGTGCTCCA ACGGCTCGGC GGGGCCCCGC TCGACCTCGG CCAGAGCCTG GGAACCCTGG GCGTGCTCGA CGGCGAGGTG CTCTATCTCA GGCCGCAGGA GGCCATGCTG CCTCCCGCGC TGTTCGACGA CGTGGCCGAC GTGGTCGCCA CCGGGGTCCA GGAGGGCTCC GACAAATGGG GCCCGCGGCA CACCCGCCTG GCCGGGGTGG GAGCCGCGGT CGCGCTCCTG CTCACCGGGG TGGCGGCCCT GGTGCTGGCC GGGCCGCCGT GGACGCCCGC CGCCGTGGTC GCCGTGGTCT TCGCGGCCCT CCTGGTCGCC GCGGGCGCCG CGATGTCCCG GGCGGCCGGC GACTCCCCGG CGGGCGCGCT GATCGGCTAC GCGGCCCTGC CGTACGGCCT GCTGGCCGGG TTGCTGGCAC CGTCGGCGGC CGGGGGACTG GGGGGACTCG GCGCGGCGCA CATGCTCGCC GCCTTCGCCT CCGTCGGCCT CGTGGCGACC ATCGCCGTGA TCGCCATCGC CGACGGCGTG CCGGTCTTCC TCGGCGCCGC CATCGCCTCG ATGACCGGAG CGGTGAGCGC GGCCGTCGTG ATGGTGTCCC AGGCGCCCGC CGCCGGGGTG GCCGCGGTCA CCGTCGCGAT CCTGCTGGGG TTCACCCCGC TGATCCCGGT CCTGTCGTTC CGGCTCGCCC GCGTGCCGAC GCCGACGATG CCCACCACCG CCGACGAACT GCGCAACGAC AACCAGCAGA TCGACGGCCC GCTCGTCGAG GAGCGCACCG CCCACGCGCT GAGCTACGCG ACCGGGATGG TCGCGGGAGT GGCGCTGGTG GCGCTGGTGG CGCAGGCCTA CCTCGTCATG CATGGCGGAT GGGTCGCCAC GGCCAACGCG CTGACGCTGT CGCTGACCCT CATCATGCGG ACCCGCGTCT TCCACGGGTT CGGCCAGCGG CTCTGGCTGA TGATCTCCGG TGTCTCCGGG CTCGTCATGT TCGCGATCTC GCAGGCCGCC GGAGGGGGAG GCCCCACCGC GATCATCGTG GTGATGGGAC TGCTGGGCGC CGCGGCGATC TGCGCGGGCC TGGGCATGTG GCTGCAGGTC GGCAAGCCGT CCCCGTTCTG GGGGCGGGCC GGGGACATCG TCGAGCTCCT GCTGATCGTC GCGCTGTTCC CGCTGGCCCT CGGCGTGCTG GAGGTCTACT CCTGGGTCCG CGGCCTGTCC GGCTGA
|
Protein sequence | MRSLAQPPAQ GPITQGALAQ FAAPLPTLCH VTIVAPRRKA DLALPADIPL PHVLPGLLRA VGEIGGDASA GPGWVLQRLG GAPLDLGQSL GTLGVLDGEV LYLRPQEAML PPALFDDVAD VVATGVQEGS DKWGPRHTRL AGVGAAVALL LTGVAALVLA GPPWTPAAVV AVVFAALLVA AGAAMSRAAG DSPAGALIGY AALPYGLLAG LLAPSAAGGL GGLGAAHMLA AFASVGLVAT IAVIAIADGV PVFLGAAIAS MTGAVSAAVV MVSQAPAAGV AAVTVAILLG FTPLIPVLSF RLARVPTPTM PTTADELRND NQQIDGPLVE ERTAHALSYA TGMVAGVALV ALVAQAYLVM HGGWVATANA LTLSLTLIMR TRVFHGFGQR LWLMISGVSG LVMFAISQAA GGGGPTAIIV VMGLLGAAAI CAGLGMWLQV GKPSPFWGRA GDIVELLLIV ALFPLALGVL EVYSWVRGLS G
|
| |