Gene Sros_8088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8088 
Symbol 
ID8671416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8911747 
End bp8913198 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003343486 
Protein GI271969290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCC GTCGCGATCT TTATCAGGCG CACAAGCTGA TGACACAGCG CCTGGGCATG 
GCCCTGCTCC AGGGAGAGCC GGACCTGTCG GAGTCACCGA TGCGCAGGCA CAACACGGCC
ACGTTCGGCG GAATTCTGGT CGCGGTGCTG GTGACGGCCG TCTTCGGGGT GATAGGCCTG
ATCCGCCCGG GCAACGCCAC CGGGCTCACC GATCCGGGGA ACCTGATCGT GGAAGAGGAG
ACAGGCGCGA TCTACGTCTA CAGCGCCCCG CAGAAGAAGA TGATCCCGGT CACCAACGTG
GCCTCCGCCA GGCTGCTGCT GAACACGCAG GACGTGAAGG TGCGCACGGT CACCGCCGCC
TCGCTCGCGA AGTACGACCG CGGCACGCTG GTGGGCATCC TGGGCGCCCC CGAGTCCCTG
CCCGCCCGCG ACCGCCTGAT CCGCGCTCCC TGGTCGGTGT GCGTCGCCGA GGGTGTCGAC
ACCAACGGCG AGCGCAAGCC GTACACCTCG CTGATCGGCG GCTTCCGCGT CGGCGGCGCC
CCGGTCGAGC AGGGCTCGGC CATGGTCGTC AGGGAGAAGG AGGGGAGCCA GGCCTGGCTG
CTGTGGGCGA ACCAGCGGCT GAAGGTGCCC GCCAGGACCG TTCGGACGCT GACCCAGGAG
CAACCTCGCC AGATCCCCGC GGCCTGGCTC AACGCCCTGC CGGAGGGGCG TCCCTTCGAG
AGGCCGGCGA TCCCGGGTCT CGGCGGTTCG GCGCGCGGGC CCGACGGCAG GAGGTCCGCG
GTCGGCAGGG TGTTCACCGT GCCGCCGGTG ACTGGCGGGC CCGCCAAGTG GTACGTCCTG
CTCGCCGACG GCCTGGCGGA CGTCAGCCCC CTCCAGGCCA CCCTGCTGCT GGCCGACCCG
GCCATCAAGC AGGCGTACGG CCGCGCGGAG CCGCTGCCGA AGGAGATCGC CCCGGCGACC
GCGAACGGGA TGAAGCAGTC AGGCACCCGT CTCGGCGTCA GCGGCCTTCC CGCGTCCATG
CCGAGGATCA TTTCTTCCGC TCCGACGAGC CCGCTCTGCG CCGTCTACTC CGAGACCGAG
CGCGGTTCGA CCCAGGCGAC CCTGACGATC GGCAGCACGG CGCCGATCCC CCAGCCGCCG
AAGGGATGGT TCAACCAGGA CGTGGCCGAC CGGGTGACGC TCTCCCGCGG TGCCGGCGCC
CTGGTGGGAG TGCTGCCGGG GAACGGCCAG ACGGGGGCGA TGAGGCCGCT CTACCTGATC
GGCGACCAGG GACGGCGGCA CGCCATCCTG TCGGCGGACA TGCTGCCCAG CCTCGGCTAC
GAGCTGAAGG ACGTCGCCCC GCTCCCGACG CAGATCGTGA AACTCATCCC CGAGGGCCCG
GCGCTCGACC CGGCGGCGGC GAAGGCGCCC GTGCAGATCG CTCCTTCGGC GACGGCTCCC
CCTCGGCAGT GA
 
Protein sequence
MQTRRDLYQA HKLMTQRLGM ALLQGEPDLS ESPMRRHNTA TFGGILVAVL VTAVFGVIGL 
IRPGNATGLT DPGNLIVEEE TGAIYVYSAP QKKMIPVTNV ASARLLLNTQ DVKVRTVTAA
SLAKYDRGTL VGILGAPESL PARDRLIRAP WSVCVAEGVD TNGERKPYTS LIGGFRVGGA
PVEQGSAMVV REKEGSQAWL LWANQRLKVP ARTVRTLTQE QPRQIPAAWL NALPEGRPFE
RPAIPGLGGS ARGPDGRRSA VGRVFTVPPV TGGPAKWYVL LADGLADVSP LQATLLLADP
AIKQAYGRAE PLPKEIAPAT ANGMKQSGTR LGVSGLPASM PRIISSAPTS PLCAVYSETE
RGSTQATLTI GSTAPIPQPP KGWFNQDVAD RVTLSRGAGA LVGVLPGNGQ TGAMRPLYLI
GDQGRRHAIL SADMLPSLGY ELKDVAPLPT QIVKLIPEGP ALDPAAAKAP VQIAPSATAP
PRQ