| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_8038 |
|---|
| Symbol | |
|---|
| ID | 8671366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 8847937 |
|---|
| End bp | 8849514 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
|---|
| Protein accession | YP_003343436 |
|---|
| Protein GI | 271969240 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACG ACCGCTTCCA TGTGTACGAC ACCACGCTCC GTGACGGTGC CCAGCAGGAG
GGCCTCAACC TCACGGTGGT CGACAAGCTG GCCATCGCGC GCCACCTGGA CGGCCTCGGC
GTCGGGTTCA TCGAGGGCGG CTGGCCCGGT GCGAACCCGA AGGACACAGA GTTCTTCAGG
CGGGCTCAAA CAGAGCTCGA CCTGAAGCAC GCGCAGCTCG CCGCGTTCGG CGCGACCCGC
CGAGCCGGTG TGAAGGCAGC CGACGACCCG TTGGTGGCCG CCCTGCGCGA ATCCGGCGCG
CCGGTCGTGA CCCTTGTCGC CAAGAGTCAC GACCGGCACG TGGAGCTGGC CCTCCGCACG
ACTCTCCAGG AGAACCTCGC GATGATCCGC GACACGGTCT CCCACCTCCG TGCGGAGGGA
CAGCGGGTCT TCCTCGACGC CGAGCACTTC TTCGACGGCT ACGCCTCCAA CCCAGCCTAC
GCGCTGGAGG TCCTGCGCAC CGCCGCCGAG GCCGGAGCCT CGGTCATCGC CCTGTGCGAC
ACCAACGGCG GCATGCTCCC CGACGAGCTC GCCGAGGTCG TGCACGCGGC CGTGCAGACC
TCCGCCCGGG TCGGCATCCA CTGCCACGAC GACACCGGCT GCGCGGTGGC CAACACCCTG
GCCGCGGTGA AGGCGGGCGC CACCCACGTG CAGGGCTGCG CCAACGGGTA CGGCGAGCGG
TCCGGCAACG CCAACCTCTT CACCGTCGTG GCCAACCTCC AGCTCAAGCG GGGCTTCGAC
CTCGTCCCGC GGGAGGCGCT GGCCGACATG ACCCGGATCG CCCACGCGAT CACCGAGGTC
ACCAACGTCA CCCCGAACTC CCACGCCCCC TATGTGGGCG TCTCCGCCTT CGCGCACAAG
GCCGGGCTGC ACGCCAGCGC CATCAAGGTG GACCCCAACC TCTACCAGCA CATCGACCCG
GCGCGGGTCG GCAACGACAT GCGCATGCTC GTCTCCGACA TGGCCGGTCG CGCCTCCGTC
GAGCTCAAGG GCCGCGAGCT GGGCTACGAG CTGTCGCCGG AGATCTCGCG CGAGCTGGTC
AACCGGGTCA AGGACATGGA GTCCAAGGGC TACACCTTCG AGGCCGCCGA CGCCTCCTTC
GAGCTGCTGC TCCGCGACAC CGTGGCGGGC GAGCGCAGGC GCCACTTCGA GGTGGAGTCC
TGGCGGGTGA TCGTCGAGCG GACCCGCGGC GGCGAGCTGG TCAGCGAGGC CACGGTCAAG
CTGCACGCCA AGGGCGAGCG CATCGTCGCC ACCGGCGAGG GCAACGGCCC GGTCAACGCC
CTGGACAGGG CCGTCAGGCT GGGGCTGGAG AGGCTCTACC CCGAGCTGGC GGAGGTCGAG
CTGACCGACT TCAAGGTGCG GATCCTGGAG GGCACCCACG GCACCGACGC CATCACGCGC
GTCCTCATCA CCTCCAGCGA CGCGACCGGC GAGTGGGCCA CCGTCGGCGT CGACGAGAAC
ATCATCGAGG CCTCCTGGCA GGCCCTTGAG CAGGCCGTCA CCTATGGCCT GGTCCGGGCG
GGCCACGTCG CCGACTGA
|
|---|
| Protein sequence | MPDDRFHVYD TTLRDGAQQE GLNLTVVDKL AIARHLDGLG VGFIEGGWPG ANPKDTEFFR
RAQTELDLKH AQLAAFGATR RAGVKAADDP LVAALRESGA PVVTLVAKSH DRHVELALRT
TLQENLAMIR DTVSHLRAEG QRVFLDAEHF FDGYASNPAY ALEVLRTAAE AGASVIALCD
TNGGMLPDEL AEVVHAAVQT SARVGIHCHD DTGCAVANTL AAVKAGATHV QGCANGYGER
SGNANLFTVV ANLQLKRGFD LVPREALADM TRIAHAITEV TNVTPNSHAP YVGVSAFAHK
AGLHASAIKV DPNLYQHIDP ARVGNDMRML VSDMAGRASV ELKGRELGYE LSPEISRELV
NRVKDMESKG YTFEAADASF ELLLRDTVAG ERRRHFEVES WRVIVERTRG GELVSEATVK
LHAKGERIVA TGEGNGPVNA LDRAVRLGLE RLYPELAEVE LTDFKVRILE GTHGTDAITR
VLITSSDATG EWATVGVDEN IIEASWQALE QAVTYGLVRA GHVAD
|
|---|
| |